Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12887B1AVM1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12887B1AVM1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12887B1AVM1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12887B1AVM1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm12887B1AVM1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm12887B1AVM1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm12887B1AVM1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm12887B1AVM1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm12887B1AVM1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm12887B1AVM1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Gm12887B1AVM1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.16■□□□□ 0.18
Gm12887B1AVM1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12887B1AVM1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12887B1AVM1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12887B1AVM1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gm12887B1AVM1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12887B1AVM1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12887B1AVM1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12887B1AVM1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12887B1AVM1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12887B1AVM1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12887B1AVM1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12887B1AVM1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12887B1AVM1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12887B1AVM1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12887B1AVM1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.15■□□□□ 0.18
Gm12887B1AVM1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12887B1AVM1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12887B1AVM1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12887B1AVM1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12887B1AVM1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12887B1AVM1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12887B1AVM1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Gm12887B1AVM1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12887B1AVM1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12887B1AVM1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12887B1AVM1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12887B1AVM1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Gm12887B1AVM1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm12887B1AVM1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.14■□□□□ 0.17
Gm12887B1AVM1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12887B1AVM1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12887B1AVM1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.14■□□□□ 0.17
Gm12887B1AVM1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12887B1AVM1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12887B1AVM1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12887B1AVM1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12887B1AVM1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm12887B1AVM1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12887B1AVM1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12887B1AVM1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12887B1AVM1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.13■□□□□ 0.17
Gm12887B1AVM1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12887B1AVM1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12887B1AVM1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12887B1AVM1 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.13■□□□□ 0.17
Gm12887B1AVM1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12887B1AVM1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Gm12887B1AVM1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12887B1AVM1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12887B1AVM1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12887B1AVM1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12887B1AVM1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12887B1AVM1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm12887B1AVM1 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.12■□□□□ 0.17
Gm12887B1AVM1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm12887B1AVM1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm12887B1AVM1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Gm12887B1AVM1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm12887B1AVM1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm12887B1AVM1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm12887B1AVM1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Gm12887B1AVM1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm12887B1AVM1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm12887B1AVM1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm12887B1AVM1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm12887B1AVM1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm12887B1AVM1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Gm12887B1AVM1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm12887B1AVM1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Gm12887B1AVM1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm12887B1AVM1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm12887B1AVM1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm12887B1AVM1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm12887B1AVM1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Gm12887B1AVM1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm12887B1AVM1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm12887B1AVM1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Gm12887B1AVM1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms