Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chd6A3KFM7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chd6A3KFM7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd6A3KFM7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.61■□□□□ 0.25
Chd6A3KFM7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd6A3KFM7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd6A3KFM7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.6■□□□□ 0.25
Chd6A3KFM7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd6A3KFM7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd6A3KFM7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd6A3KFM7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd6A3KFM7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd6A3KFM7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd6A3KFM7 Gm10517-202ENSMUST00000192970 758 ntBASIC16.59■□□□□ 0.25
Chd6A3KFM7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd6A3KFM7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd6A3KFM7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.59■□□□□ 0.25
Chd6A3KFM7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd6A3KFM7 Gm37055-201ENSMUST00000191866 133 ntBASIC16.59■□□□□ 0.25
Chd6A3KFM7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd6A3KFM7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
Chd6A3KFM7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd6A3KFM7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd6A3KFM7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
Chd6A3KFM7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd6A3KFM7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.58■□□□□ 0.24
Chd6A3KFM7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd6A3KFM7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chd6A3KFM7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chd6A3KFM7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd6A3KFM7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.57■□□□□ 0.24
Chd6A3KFM7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd6A3KFM7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd6A3KFM7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd6A3KFM7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.57■□□□□ 0.24
Chd6A3KFM7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd6A3KFM7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chd6A3KFM7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.56■□□□□ 0.24
Chd6A3KFM7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd6A3KFM7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd6A3KFM7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd6A3KFM7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd6A3KFM7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Chd6A3KFM7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd6A3KFM7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.56■□□□□ 0.24
Chd6A3KFM7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd6A3KFM7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd6A3KFM7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd6A3KFM7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.55■□□□□ 0.24
Chd6A3KFM7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd6A3KFM7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd6A3KFM7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.55■□□□□ 0.24
Chd6A3KFM7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd6A3KFM7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.55■□□□□ 0.24
Chd6A3KFM7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd6A3KFM7 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.54■□□□□ 0.24
Chd6A3KFM7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd6A3KFM7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd6A3KFM7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd6A3KFM7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Chd6A3KFM7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Chd6A3KFM7 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.53■□□□□ 0.24
Chd6A3KFM7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd6A3KFM7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Chd6A3KFM7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Chd6A3KFM7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd6A3KFM7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd6A3KFM7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.53■□□□□ 0.24
Chd6A3KFM7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Chd6A3KFM7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd6A3KFM7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd6A3KFM7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd6A3KFM7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd6A3KFM7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd6A3KFM7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd6A3KFM7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd6A3KFM7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd6A3KFM7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.52■□□□□ 0.23
Chd6A3KFM7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
Chd6A3KFM7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.52■□□□□ 0.23
Chd6A3KFM7 Gm6420-201ENSMUST00000193885 723 ntBASIC16.52■□□□□ 0.23
Chd6A3KFM7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd6A3KFM7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd6A3KFM7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.52■□□□□ 0.23
Chd6A3KFM7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd6A3KFM7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd6A3KFM7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.51■□□□□ 0.23
Chd6A3KFM7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd6A3KFM7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd6A3KFM7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Chd6A3KFM7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd6A3KFM7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.51■□□□□ 0.23
Chd6A3KFM7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.51■□□□□ 0.23
Chd6A3KFM7 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.51■□□□□ 0.23
Chd6A3KFM7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd6A3KFM7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd6A3KFM7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd6A3KFM7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd6A3KFM7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.51■□□□□ 0.23
Chd6A3KFM7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms