Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn1aA2APX8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Scn1aA2APX8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn1aA2APX8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn1aA2APX8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.2■□□□□ 0.98
Scn1aA2APX8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.19■□□□□ 0.98
Scn1aA2APX8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Scn1aA2APX8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn1aA2APX8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn1aA2APX8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Scn1aA2APX8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.19■□□□□ 0.98
Scn1aA2APX8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn1aA2APX8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Scn1aA2APX8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn1aA2APX8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn1aA2APX8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn1aA2APX8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn1aA2APX8 Smad6-203ENSMUST00000179458 273 ntBASIC21.18■□□□□ 0.98
Scn1aA2APX8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn1aA2APX8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scn1aA2APX8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn1aA2APX8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn1aA2APX8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Scn1aA2APX8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn1aA2APX8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.18■□□□□ 0.98
Scn1aA2APX8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn1aA2APX8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn1aA2APX8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scn1aA2APX8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn1aA2APX8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn1aA2APX8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn1aA2APX8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn1aA2APX8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scn1aA2APX8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn1aA2APX8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn1aA2APX8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.16■□□□□ 0.98
Scn1aA2APX8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn1aA2APX8 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.16■□□□□ 0.98
Scn1aA2APX8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn1aA2APX8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn1aA2APX8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn1aA2APX8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Scn1aA2APX8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.16■□□□□ 0.98
Scn1aA2APX8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.16■□□□□ 0.98
Scn1aA2APX8 Gm26833-201ENSMUST00000180899 440 ntBASIC21.16■□□□□ 0.98
Scn1aA2APX8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn1aA2APX8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.15■□□□□ 0.98
Scn1aA2APX8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Scn1aA2APX8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn1aA2APX8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn1aA2APX8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
Scn1aA2APX8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.15■□□□□ 0.98
Scn1aA2APX8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn1aA2APX8 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.15■□□□□ 0.98
Scn1aA2APX8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn1aA2APX8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scn1aA2APX8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Scn1aA2APX8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn1aA2APX8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn1aA2APX8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn1aA2APX8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scn1aA2APX8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Scn1aA2APX8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scn1aA2APX8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scn1aA2APX8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn1aA2APX8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.14■□□□□ 0.97
Scn1aA2APX8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.14■□□□□ 0.97
Scn1aA2APX8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn1aA2APX8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.14■□□□□ 0.97
Scn1aA2APX8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn1aA2APX8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.13■□□□□ 0.97
Scn1aA2APX8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn1aA2APX8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn1aA2APX8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scn1aA2APX8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn1aA2APX8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn1aA2APX8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn1aA2APX8 Gm40848-201ENSMUST00000221998 324 ntBASIC21.13■□□□□ 0.97
Scn1aA2APX8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn1aA2APX8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn1aA2APX8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn1aA2APX8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn1aA2APX8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn1aA2APX8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.12■□□□□ 0.97
Scn1aA2APX8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Scn1aA2APX8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Scn1aA2APX8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn1aA2APX8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn1aA2APX8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn1aA2APX8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scn1aA2APX8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.12■□□□□ 0.97
Scn1aA2APX8 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.12■□□□□ 0.97
Scn1aA2APX8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Scn1aA2APX8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Scn1aA2APX8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn1aA2APX8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scn1aA2APX8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn1aA2APX8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Scn1aA2APX8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn1aA2APX8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms