Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Mir6236-201ENSMUST00000184437 123 ntBASIC20.14■□□□□ 0.81
Gm3854A0A1B0GSS6 Gm10033-202ENSMUST00000211874 928 ntBASIC20.14■□□□□ 0.81
Gm3854A0A1B0GSS6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3854A0A1B0GSS6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3854A0A1B0GSS6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3854A0A1B0GSS6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3854A0A1B0GSS6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3854A0A1B0GSS6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3854A0A1B0GSS6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3854A0A1B0GSS6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3854A0A1B0GSS6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3854A0A1B0GSS6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3854A0A1B0GSS6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3854A0A1B0GSS6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.13■□□□□ 0.81
Gm3854A0A1B0GSS6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3854A0A1B0GSS6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3854A0A1B0GSS6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Gm3854A0A1B0GSS6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3854A0A1B0GSS6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Gm3854A0A1B0GSS6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Gm3854A0A1B0GSS6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Gm3854A0A1B0GSS6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Gm3854A0A1B0GSS6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3854A0A1B0GSS6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3854A0A1B0GSS6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.11■□□□□ 0.81
Gm3854A0A1B0GSS6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3854A0A1B0GSS6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3854A0A1B0GSS6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3854A0A1B0GSS6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.1■□□□□ 0.81
Gm3854A0A1B0GSS6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.1■□□□□ 0.81
Gm3854A0A1B0GSS6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.1■□□□□ 0.81
Gm3854A0A1B0GSS6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.1■□□□□ 0.81
Gm3854A0A1B0GSS6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3854A0A1B0GSS6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3854A0A1B0GSS6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3854A0A1B0GSS6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3854A0A1B0GSS6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3854A0A1B0GSS6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3854A0A1B0GSS6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3854A0A1B0GSS6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Gm3854A0A1B0GSS6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.09■□□□□ 0.81
Gm3854A0A1B0GSS6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3854A0A1B0GSS6 Gm9988-201ENSMUST00000069786 435 ntBASIC20.09■□□□□ 0.81
Gm3854A0A1B0GSS6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Gm3854A0A1B0GSS6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Gm3854A0A1B0GSS6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3854A0A1B0GSS6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Gm3854A0A1B0GSS6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3854A0A1B0GSS6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3854A0A1B0GSS6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Gm3854A0A1B0GSS6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3854A0A1B0GSS6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3854A0A1B0GSS6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Gm3854A0A1B0GSS6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.08■□□□□ 0.81
Gm3854A0A1B0GSS6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3854A0A1B0GSS6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.08■□□□□ 0.81
Gm3854A0A1B0GSS6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm3854A0A1B0GSS6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm3854A0A1B0GSS6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Gm3854A0A1B0GSS6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Gm3854A0A1B0GSS6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3854A0A1B0GSS6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3854A0A1B0GSS6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3854A0A1B0GSS6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3854A0A1B0GSS6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3854A0A1B0GSS6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3854A0A1B0GSS6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Gm3854A0A1B0GSS6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3854A0A1B0GSS6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3854A0A1B0GSS6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.06■□□□□ 0.8
Gm3854A0A1B0GSS6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3854A0A1B0GSS6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Gm3854A0A1B0GSS6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3854A0A1B0GSS6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3854A0A1B0GSS6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3854A0A1B0GSS6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3854A0A1B0GSS6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3854A0A1B0GSS6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3854A0A1B0GSS6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Gm3854A0A1B0GSS6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3854A0A1B0GSS6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3854A0A1B0GSS6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.05■□□□□ 0.8
Gm3854A0A1B0GSS6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3854A0A1B0GSS6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3854A0A1B0GSS6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3854A0A1B0GSS6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3854A0A1B0GSS6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3854A0A1B0GSS6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3854A0A1B0GSS6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3854A0A1B0GSS6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3854A0A1B0GSS6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3854A0A1B0GSS6 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.04■□□□□ 0.8
Gm3854A0A1B0GSS6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3854A0A1B0GSS6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Gm3854A0A1B0GSS6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3854A0A1B0GSS6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3854A0A1B0GSS6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3854A0A1B0GSS6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3854A0A1B0GSS6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3854A0A1B0GSS6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms