Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 Gm34220-201ENSMUST00000223001 2709 ntBASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Igkv1-88A0A140T8N1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Gm10420-201ENSMUST00000121713 882 ntBASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igkv1-88A0A140T8N1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Iqck-206ENSMUST00000208658 2891 ntBASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igkv1-88A0A140T8N1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Igkv1-88A0A140T8N1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Gm8093-201ENSMUST00000128935 1892 ntBASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Igkv1-88A0A140T8N1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms