Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC43.16■■■■■ 4.5
Gm35339A0A140LHH9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC43.15■■■■■ 4.5
Gm35339A0A140LHH9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC43.14■■■■■ 4.5
Gm35339A0A140LHH9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC43.14■■■■■ 4.5
Gm35339A0A140LHH9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC43.14■■■■■ 4.5
Gm35339A0A140LHH9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC43.14■■■■■ 4.5
Gm35339A0A140LHH9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC43.14■■■■■ 4.5
Gm35339A0A140LHH9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC43.14■■■■■ 4.5
Gm35339A0A140LHH9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC43.14■■■■■ 4.5
Gm35339A0A140LHH9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC43.12■■■■■ 4.49
Gm35339A0A140LHH9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC43.12■■■■■ 4.49
Gm35339A0A140LHH9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC43.12■■■■■ 4.49
Gm35339A0A140LHH9 Mir6236-201ENSMUST00000184437 123 ntBASIC43.12■■■■■ 4.49
Gm35339A0A140LHH9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC43.12■■■■■ 4.49
Gm35339A0A140LHH9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC43.12■■■■■ 4.49
Gm35339A0A140LHH9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC43.12■■■■■ 4.49
Gm35339A0A140LHH9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC43.12■■■■■ 4.49
Gm35339A0A140LHH9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC43.11■■■■■ 4.49
Gm35339A0A140LHH9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC43.11■■■■■ 4.49
Gm35339A0A140LHH9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC43.11■■■■■ 4.49
Gm35339A0A140LHH9 Gm26524-201ENSMUST00000192339 390 ntBASIC43.11■■■■■ 4.49
Gm35339A0A140LHH9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC43.11■■■■■ 4.49
Gm35339A0A140LHH9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC43.11■■■■■ 4.49
Gm35339A0A140LHH9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC43.11■■■■■ 4.49
Gm35339A0A140LHH9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC43.11■■■■■ 4.49
Gm35339A0A140LHH9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC43.11■■■■■ 4.49
Gm35339A0A140LHH9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC43.1■■■■■ 4.49
Gm35339A0A140LHH9 Gm10571-201ENSMUST00000097869 1638 ntBASIC43.1■■■■■ 4.49
Gm35339A0A140LHH9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC43.1■■■■■ 4.49
Gm35339A0A140LHH9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC43.09■■■■■ 4.49
Gm35339A0A140LHH9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC43.09■■■■■ 4.49
Gm35339A0A140LHH9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC43.08■■■■■ 4.49
Gm35339A0A140LHH9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC43.08■■■■■ 4.49
Gm35339A0A140LHH9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC43.08■■■■■ 4.49
Gm35339A0A140LHH9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC43.08■■■■■ 4.49
Gm35339A0A140LHH9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC43.08■■■■■ 4.49
Gm35339A0A140LHH9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC43.06■■■■■ 4.48
Gm35339A0A140LHH9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC43.06■■■■■ 4.48
Gm35339A0A140LHH9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC43.06■■■■■ 4.48
Gm35339A0A140LHH9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC43.06■■■■■ 4.48
Gm35339A0A140LHH9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC43.06■■■■■ 4.48
Gm35339A0A140LHH9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC43.06■■■■■ 4.48
Gm35339A0A140LHH9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC43.05■■■■■ 4.48
Gm35339A0A140LHH9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC43.05■■■■■ 4.48
Gm35339A0A140LHH9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC43.05■■■■■ 4.48
Gm35339A0A140LHH9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC43.05■■■■■ 4.48
Gm35339A0A140LHH9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC43.05■■■■■ 4.48
Gm35339A0A140LHH9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC43.04■■■■■ 4.48
Gm35339A0A140LHH9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC43.04■■■■■ 4.48
Gm35339A0A140LHH9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC43.03■■■■■ 4.48
Gm35339A0A140LHH9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC43.03■■■■■ 4.48
Gm35339A0A140LHH9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC43.02■■■■■ 4.48
Gm35339A0A140LHH9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC43.02■■■■■ 4.48
Gm35339A0A140LHH9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC43.02■■■■■ 4.48
Gm35339A0A140LHH9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC43.01■■■■■ 4.48
Gm35339A0A140LHH9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC43.01■■■■■ 4.48
Gm35339A0A140LHH9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC43.01■■■■■ 4.48
Gm35339A0A140LHH9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC43■■■■■ 4.47
Gm35339A0A140LHH9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC43■■■■■ 4.47
Gm35339A0A140LHH9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC43■■■■■ 4.47
Gm35339A0A140LHH9 Gm22240-201ENSMUST00000175225 82 ntBASIC43■■■■■ 4.47
Gm35339A0A140LHH9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC43■■■■■ 4.47
Gm35339A0A140LHH9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC42.99■■■■■ 4.47
Gm35339A0A140LHH9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC42.99■■■■■ 4.47
Gm35339A0A140LHH9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC42.99■■■■■ 4.47
Gm35339A0A140LHH9 AC122769.4-201ENSMUST00000228166 901 ntBASIC42.99■■■■■ 4.47
Gm35339A0A140LHH9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC42.99■■■■■ 4.47
Gm35339A0A140LHH9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC42.98■■■■■ 4.47
Gm35339A0A140LHH9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC42.98■■■■■ 4.47
Gm35339A0A140LHH9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC42.98■■■■■ 4.47
Gm35339A0A140LHH9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC42.98■■■■■ 4.47
Gm35339A0A140LHH9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC42.97■■■■■ 4.47
Gm35339A0A140LHH9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC42.97■■■■■ 4.47
Gm35339A0A140LHH9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC42.97■■■■■ 4.47
Gm35339A0A140LHH9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC42.97■■■■■ 4.47
Gm35339A0A140LHH9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC42.97■■■■■ 4.47
Gm35339A0A140LHH9 Gm8520-201ENSMUST00000186517 868 ntBASIC42.97■■■■■ 4.47
Gm35339A0A140LHH9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC42.97■■■■■ 4.47
Gm35339A0A140LHH9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC42.97■■■■■ 4.47
Gm35339A0A140LHH9 Gm5913-201ENSMUST00000119397 1399 ntBASIC42.96■■■■■ 4.47
Gm35339A0A140LHH9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC42.96■■■■■ 4.47
Gm35339A0A140LHH9 Gm6211-202ENSMUST00000167849 925 ntBASIC42.95■■■■■ 4.47
Gm35339A0A140LHH9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC42.95■■■■■ 4.47
Gm35339A0A140LHH9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC42.94■■■■■ 4.46
Gm35339A0A140LHH9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC42.94■■■■■ 4.46
Gm35339A0A140LHH9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC42.94■■■■■ 4.46
Gm35339A0A140LHH9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC42.94■■■■■ 4.46
Gm35339A0A140LHH9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC42.93■■■■■ 4.46
Gm35339A0A140LHH9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC42.93■■■■■ 4.46
Gm35339A0A140LHH9 Gm43403-201ENSMUST00000198011 1786 ntBASIC42.93■■■■■ 4.46
Gm35339A0A140LHH9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC42.93■■■■■ 4.46
Gm35339A0A140LHH9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC42.92■■■■■ 4.46
Gm35339A0A140LHH9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC42.92■■■■■ 4.46
Gm35339A0A140LHH9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC42.92■■■■■ 4.46
Gm35339A0A140LHH9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC42.92■■■■■ 4.46
Gm35339A0A140LHH9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC42.91■■■■■ 4.46
Gm35339A0A140LHH9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC42.91■■■■■ 4.46
Gm35339A0A140LHH9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC42.91■■■■■ 4.46
Gm35339A0A140LHH9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC42.91■■■■■ 4.46
Gm35339A0A140LHH9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC42.9■■■■■ 4.46
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms