Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
1700028J19RikA0A0U1RP08 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
1700028J19RikA0A0U1RP08 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
1700028J19RikA0A0U1RP08 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
1700028J19RikA0A0U1RP08 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
1700028J19RikA0A0U1RP08 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
1700028J19RikA0A0U1RP08 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
1700028J19RikA0A0U1RP08 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
1700028J19RikA0A0U1RP08 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
1700028J19RikA0A0U1RP08 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
1700028J19RikA0A0U1RP08 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
1700028J19RikA0A0U1RP08 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
1700028J19RikA0A0U1RP08 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
1700028J19RikA0A0U1RP08 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.82■□□□□ 0.6
1700028J19RikA0A0U1RP08 Gm43530-201ENSMUST00000195920 274 ntBASIC18.82■□□□□ 0.6
1700028J19RikA0A0U1RP08 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
1700028J19RikA0A0U1RP08 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
1700028J19RikA0A0U1RP08 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
1700028J19RikA0A0U1RP08 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.82■□□□□ 0.6
1700028J19RikA0A0U1RP08 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
1700028J19RikA0A0U1RP08 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
1700028J19RikA0A0U1RP08 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
1700028J19RikA0A0U1RP08 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
1700028J19RikA0A0U1RP08 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
1700028J19RikA0A0U1RP08 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
1700028J19RikA0A0U1RP08 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
1700028J19RikA0A0U1RP08 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.81■□□□□ 0.6
1700028J19RikA0A0U1RP08 Gm9959-201ENSMUST00000068277 390 ntBASIC18.81■□□□□ 0.6
1700028J19RikA0A0U1RP08 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
1700028J19RikA0A0U1RP08 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.81■□□□□ 0.6
1700028J19RikA0A0U1RP08 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
1700028J19RikA0A0U1RP08 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.81■□□□□ 0.6
1700028J19RikA0A0U1RP08 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
1700028J19RikA0A0U1RP08 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
1700028J19RikA0A0U1RP08 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
1700028J19RikA0A0U1RP08 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
1700028J19RikA0A0U1RP08 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.8■□□□□ 0.6
1700028J19RikA0A0U1RP08 Mir6236-201ENSMUST00000184437 123 ntBASIC18.8■□□□□ 0.6
1700028J19RikA0A0U1RP08 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
1700028J19RikA0A0U1RP08 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.8■□□□□ 0.6
1700028J19RikA0A0U1RP08 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
1700028J19RikA0A0U1RP08 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
1700028J19RikA0A0U1RP08 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
1700028J19RikA0A0U1RP08 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
1700028J19RikA0A0U1RP08 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700028J19RikA0A0U1RP08 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700028J19RikA0A0U1RP08 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700028J19RikA0A0U1RP08 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
1700028J19RikA0A0U1RP08 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700028J19RikA0A0U1RP08 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
1700028J19RikA0A0U1RP08 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700028J19RikA0A0U1RP08 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
1700028J19RikA0A0U1RP08 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.79■□□□□ 0.6
1700028J19RikA0A0U1RP08 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.79■□□□□ 0.6
1700028J19RikA0A0U1RP08 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
1700028J19RikA0A0U1RP08 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700028J19RikA0A0U1RP08 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700028J19RikA0A0U1RP08 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
1700028J19RikA0A0U1RP08 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
1700028J19RikA0A0U1RP08 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
1700028J19RikA0A0U1RP08 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
1700028J19RikA0A0U1RP08 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
1700028J19RikA0A0U1RP08 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
1700028J19RikA0A0U1RP08 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
1700028J19RikA0A0U1RP08 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
1700028J19RikA0A0U1RP08 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
1700028J19RikA0A0U1RP08 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.77■□□□□ 0.6
1700028J19RikA0A0U1RP08 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
1700028J19RikA0A0U1RP08 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
1700028J19RikA0A0U1RP08 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
1700028J19RikA0A0U1RP08 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
1700028J19RikA0A0U1RP08 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
1700028J19RikA0A0U1RP08 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.77■□□□□ 0.6
1700028J19RikA0A0U1RP08 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
1700028J19RikA0A0U1RP08 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
1700028J19RikA0A0U1RP08 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
1700028J19RikA0A0U1RP08 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
1700028J19RikA0A0U1RP08 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
1700028J19RikA0A0U1RP08 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
1700028J19RikA0A0U1RP08 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
1700028J19RikA0A0U1RP08 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.76■□□□□ 0.59
1700028J19RikA0A0U1RP08 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
1700028J19RikA0A0U1RP08 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.76■□□□□ 0.59
1700028J19RikA0A0U1RP08 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.76■□□□□ 0.59
1700028J19RikA0A0U1RP08 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.76■□□□□ 0.59
1700028J19RikA0A0U1RP08 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms