Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Gm5580A0A0N4SVP8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Gm5580A0A0N4SVP8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm5580A0A0N4SVP8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm5580A0A0N4SVP8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm5580A0A0N4SVP8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm5580A0A0N4SVP8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gm5580A0A0N4SVP8 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.83■■□□□ 1.09
Gm5580A0A0N4SVP8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Gm5580A0A0N4SVP8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gm5580A0A0N4SVP8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gm5580A0A0N4SVP8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.83■■□□□ 1.09
Gm5580A0A0N4SVP8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Gm5580A0A0N4SVP8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gm5580A0A0N4SVP8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gm5580A0A0N4SVP8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Gm5580A0A0N4SVP8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Gm5580A0A0N4SVP8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Gm5580A0A0N4SVP8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Gm5580A0A0N4SVP8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm5580A0A0N4SVP8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.82■■□□□ 1.08
Gm5580A0A0N4SVP8 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.82■■□□□ 1.08
Gm5580A0A0N4SVP8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.82■■□□□ 1.08
Gm5580A0A0N4SVP8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Gm5580A0A0N4SVP8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Gm5580A0A0N4SVP8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.82■■□□□ 1.08
Gm5580A0A0N4SVP8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm5580A0A0N4SVP8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm5580A0A0N4SVP8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm5580A0A0N4SVP8 Gm10232-201ENSMUST00000089221 720 ntBASIC21.81■■□□□ 1.08
Gm5580A0A0N4SVP8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm5580A0A0N4SVP8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm5580A0A0N4SVP8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Gm5580A0A0N4SVP8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm5580A0A0N4SVP8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm5580A0A0N4SVP8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Gm5580A0A0N4SVP8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm5580A0A0N4SVP8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm5580A0A0N4SVP8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm5580A0A0N4SVP8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm5580A0A0N4SVP8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm5580A0A0N4SVP8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm5580A0A0N4SVP8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm5580A0A0N4SVP8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm5580A0A0N4SVP8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm5580A0A0N4SVP8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm5580A0A0N4SVP8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm5580A0A0N4SVP8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.79■■□□□ 1.08
Gm5580A0A0N4SVP8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Gm5580A0A0N4SVP8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.78■■□□□ 1.08
Gm5580A0A0N4SVP8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm5580A0A0N4SVP8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.78■■□□□ 1.08
Gm5580A0A0N4SVP8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.78■■□□□ 1.08
Gm5580A0A0N4SVP8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm5580A0A0N4SVP8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Gm5580A0A0N4SVP8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm5580A0A0N4SVP8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm5580A0A0N4SVP8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.77■■□□□ 1.08
Gm5580A0A0N4SVP8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Gm5580A0A0N4SVP8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Gm5580A0A0N4SVP8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm5580A0A0N4SVP8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.77■■□□□ 1.07
Gm5580A0A0N4SVP8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm5580A0A0N4SVP8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Gm5580A0A0N4SVP8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Gm5580A0A0N4SVP8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Gm5580A0A0N4SVP8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Gm5580A0A0N4SVP8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Gm5580A0A0N4SVP8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Gm5580A0A0N4SVP8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.76■■□□□ 1.07
Gm5580A0A0N4SVP8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm5580A0A0N4SVP8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm5580A0A0N4SVP8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm5580A0A0N4SVP8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm5580A0A0N4SVP8 Gm7143-201ENSMUST00000222811 859 ntBASIC21.75■■□□□ 1.07
Gm5580A0A0N4SVP8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm5580A0A0N4SVP8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm5580A0A0N4SVP8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Gm5580A0A0N4SVP8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Gm5580A0A0N4SVP8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm5580A0A0N4SVP8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm5580A0A0N4SVP8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm5580A0A0N4SVP8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Gm5580A0A0N4SVP8 Gm5812-201ENSMUST00000061073 957 ntBASIC21.74■■□□□ 1.07
Gm5580A0A0N4SVP8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm5580A0A0N4SVP8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
Gm5580A0A0N4SVP8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Gm5580A0A0N4SVP8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm5580A0A0N4SVP8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm5580A0A0N4SVP8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.74■■□□□ 1.07
Gm5580A0A0N4SVP8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Gm5580A0A0N4SVP8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm5580A0A0N4SVP8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm5580A0A0N4SVP8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm5580A0A0N4SVP8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.73■■□□□ 1.07
Gm5580A0A0N4SVP8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Gm5580A0A0N4SVP8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
Gm5580A0A0N4SVP8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Gm5580A0A0N4SVP8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Gm5580A0A0N4SVP8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms