Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.4■□□□□ 0.06
Trav7-1A0A0G2JEV5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-1A0A0G2JEV5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-1A0A0G2JEV5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav7-1A0A0G2JEV5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav7-1A0A0G2JEV5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-1A0A0G2JEV5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-1A0A0G2JEV5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-1A0A0G2JEV5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-1A0A0G2JEV5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-1A0A0G2JEV5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-1A0A0G2JEV5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.39■□□□□ 0.05
Trav7-1A0A0G2JEV5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.39■□□□□ 0.05
Trav7-1A0A0G2JEV5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav7-1A0A0G2JEV5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-1A0A0G2JEV5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-1A0A0G2JEV5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-1A0A0G2JEV5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav7-1A0A0G2JEV5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav7-1A0A0G2JEV5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-1A0A0G2JEV5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav7-1A0A0G2JEV5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-1A0A0G2JEV5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-1A0A0G2JEV5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-1A0A0G2JEV5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.37■□□□□ 0.05
Trav7-1A0A0G2JEV5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav7-1A0A0G2JEV5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-1A0A0G2JEV5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-1A0A0G2JEV5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav7-1A0A0G2JEV5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-1A0A0G2JEV5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-1A0A0G2JEV5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-1A0A0G2JEV5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-1A0A0G2JEV5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav7-1A0A0G2JEV5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-1A0A0G2JEV5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-1A0A0G2JEV5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-1A0A0G2JEV5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-1A0A0G2JEV5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-1A0A0G2JEV5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-1A0A0G2JEV5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav7-1A0A0G2JEV5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav7-1A0A0G2JEV5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Gm13238-201ENSMUST00000117655 780 ntBASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav7-1A0A0G2JEV5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7-1A0A0G2JEV5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav7-1A0A0G2JEV5 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.33■□□□□ 0.05
Trav7-1A0A0G2JEV5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Trav7-1A0A0G2JEV5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.33■□□□□ 0.05
Trav7-1A0A0G2JEV5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7-1A0A0G2JEV5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms