Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3n-3A0A0G2JEM0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav3n-3A0A0G2JEM0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3n-3A0A0G2JEM0 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.05■□□□□ -0
Trav3n-3A0A0G2JEM0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3n-3A0A0G2JEM0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3n-3A0A0G2JEM0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav3n-3A0A0G2JEM0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav3n-3A0A0G2JEM0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3n-3A0A0G2JEM0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav3n-3A0A0G2JEM0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3n-3A0A0G2JEM0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3n-3A0A0G2JEM0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3n-3A0A0G2JEM0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav3n-3A0A0G2JEM0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3n-3A0A0G2JEM0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.03■□□□□ -0
Trav3n-3A0A0G2JEM0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3n-3A0A0G2JEM0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3n-3A0A0G2JEM0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav3n-3A0A0G2JEM0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav3n-3A0A0G2JEM0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav3n-3A0A0G2JEM0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav3n-3A0A0G2JEM0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav3n-3A0A0G2JEM0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav3n-3A0A0G2JEM0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav3n-3A0A0G2JEM0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.02■□□□□ -0
Trav3n-3A0A0G2JEM0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav3n-3A0A0G2JEM0 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.02■□□□□ -0
Trav3n-3A0A0G2JEM0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav3n-3A0A0G2JEM0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Dapk1-207ENSMUST00000226059 5009 ntBASIC15□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.99□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3n-3A0A0G2JEM0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms