Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav9n-2A0A0G2JDP3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.52□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Rps24-207ENSMUST00000224568 714 ntBASIC14.52□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Gm14117-201ENSMUST00000122417 843 ntBASIC14.51□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav9n-2A0A0G2JDP3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Gm9870-201ENSMUST00000063874 645 ntBASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Gm22238-201ENSMUST00000175222 88 ntBASIC14.47□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Gm45102-201ENSMUST00000207427 857 ntBASIC14.47□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9n-2A0A0G2JDP3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav9n-2A0A0G2JDP3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms