Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv26A0A0B4J1P5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv26A0A0B4J1P5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv26A0A0B4J1P5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.62■□□□□ 0.25
Trbv26A0A0B4J1P5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.62■□□□□ 0.25
Trbv26A0A0B4J1P5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv26A0A0B4J1P5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Trbv26A0A0B4J1P5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv26A0A0B4J1P5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv26A0A0B4J1P5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv26A0A0B4J1P5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv26A0A0B4J1P5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv26A0A0B4J1P5 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.62■□□□□ 0.25
Trbv26A0A0B4J1P5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv26A0A0B4J1P5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv26A0A0B4J1P5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv26A0A0B4J1P5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv26A0A0B4J1P5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv26A0A0B4J1P5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Trbv26A0A0B4J1P5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv26A0A0B4J1P5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv26A0A0B4J1P5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.61■□□□□ 0.25
Trbv26A0A0B4J1P5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.61■□□□□ 0.25
Trbv26A0A0B4J1P5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv26A0A0B4J1P5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv26A0A0B4J1P5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv26A0A0B4J1P5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv26A0A0B4J1P5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv26A0A0B4J1P5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trbv26A0A0B4J1P5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.6■□□□□ 0.25
Trbv26A0A0B4J1P5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv26A0A0B4J1P5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv26A0A0B4J1P5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv26A0A0B4J1P5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv26A0A0B4J1P5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Gm21956-201ENSMUST00000179946 522 ntBASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv26A0A0B4J1P5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv26A0A0B4J1P5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv26A0A0B4J1P5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Trbv26A0A0B4J1P5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv26A0A0B4J1P5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.58■□□□□ 0.24
Trbv26A0A0B4J1P5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv26A0A0B4J1P5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv26A0A0B4J1P5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv26A0A0B4J1P5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv26A0A0B4J1P5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv26A0A0B4J1P5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv26A0A0B4J1P5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trbv26A0A0B4J1P5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv26A0A0B4J1P5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv26A0A0B4J1P5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trbv26A0A0B4J1P5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv26A0A0B4J1P5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv26A0A0B4J1P5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv26A0A0B4J1P5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv26A0A0B4J1P5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv26A0A0B4J1P5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv26A0A0B4J1P5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv26A0A0B4J1P5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv26A0A0B4J1P5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.56■□□□□ 0.24
Trbv26A0A0B4J1P5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv26A0A0B4J1P5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv26A0A0B4J1P5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv26A0A0B4J1P5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv26A0A0B4J1P5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv26A0A0B4J1P5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv26A0A0B4J1P5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv26A0A0B4J1P5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trbv26A0A0B4J1P5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv26A0A0B4J1P5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv26A0A0B4J1P5 Gm12821-201ENSMUST00000120022 600 ntBASIC16.55■□□□□ 0.24
Trbv26A0A0B4J1P5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv26A0A0B4J1P5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv26A0A0B4J1P5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trbv26A0A0B4J1P5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv26A0A0B4J1P5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv26A0A0B4J1P5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Trbv26A0A0B4J1P5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.55■□□□□ 0.24
Trbv26A0A0B4J1P5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv26A0A0B4J1P5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv26A0A0B4J1P5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv26A0A0B4J1P5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trbv26A0A0B4J1P5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv26A0A0B4J1P5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv26A0A0B4J1P5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv26A0A0B4J1P5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv26A0A0B4J1P5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms