Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav19A0A0B4J1K4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav19A0A0B4J1K4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav19A0A0B4J1K4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav19A0A0B4J1K4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav19A0A0B4J1K4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav19A0A0B4J1K4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.93□□□□□ -0.02
Trav19A0A0B4J1K4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav19A0A0B4J1K4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav19A0A0B4J1K4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav19A0A0B4J1K4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav19A0A0B4J1K4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav19A0A0B4J1K4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav19A0A0B4J1K4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav19A0A0B4J1K4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav19A0A0B4J1K4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav19A0A0B4J1K4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav19A0A0B4J1K4 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.92□□□□□ -0.02
Trav19A0A0B4J1K4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trav19A0A0B4J1K4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav19A0A0B4J1K4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav19A0A0B4J1K4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav19A0A0B4J1K4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav19A0A0B4J1K4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav19A0A0B4J1K4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav19A0A0B4J1K4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav19A0A0B4J1K4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav19A0A0B4J1K4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav19A0A0B4J1K4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Gm11175-201ENSMUST00000116172 543 ntBASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav19A0A0B4J1K4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Gm12366-201ENSMUST00000121722 873 ntBASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Gm5786-201ENSMUST00000085368 882 ntBASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav19A0A0B4J1K4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav19A0A0B4J1K4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.89□□□□□ -0.03
Trav19A0A0B4J1K4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav19A0A0B4J1K4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav19A0A0B4J1K4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav19A0A0B4J1K4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav19A0A0B4J1K4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.89□□□□□ -0.03
Trav19A0A0B4J1K4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav19A0A0B4J1K4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms