Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav9-4A0A0B4J1K2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-4A0A0B4J1K2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-4A0A0B4J1K2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15□□□□□ -0.01
Trav9-4A0A0B4J1K2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-4A0A0B4J1K2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-4A0A0B4J1K2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav9-4A0A0B4J1K2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav9-4A0A0B4J1K2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-4A0A0B4J1K2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15□□□□□ -0.01
Trav9-4A0A0B4J1K2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-4A0A0B4J1K2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-4A0A0B4J1K2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-4A0A0B4J1K2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-4A0A0B4J1K2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15□□□□□ -0.01
Trav9-4A0A0B4J1K2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-4A0A0B4J1K2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-4A0A0B4J1K2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-4A0A0B4J1K2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-4A0A0B4J1K2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-4A0A0B4J1K2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-4A0A0B4J1K2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav9-4A0A0B4J1K2 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.98□□□□□ -0.01
Trav9-4A0A0B4J1K2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-4A0A0B4J1K2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-4A0A0B4J1K2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav9-4A0A0B4J1K2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-4A0A0B4J1K2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-4A0A0B4J1K2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-4A0A0B4J1K2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-4A0A0B4J1K2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-4A0A0B4J1K2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-4A0A0B4J1K2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav9-4A0A0B4J1K2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.97□□□□□ -0.01
Trav9-4A0A0B4J1K2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-4A0A0B4J1K2 Gm13241-201ENSMUST00000094493 780 ntBASIC14.97□□□□□ -0.01
Trav9-4A0A0B4J1K2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-4A0A0B4J1K2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav9-4A0A0B4J1K2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-4A0A0B4J1K2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-4A0A0B4J1K2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-4A0A0B4J1K2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav9-4A0A0B4J1K2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-4A0A0B4J1K2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav9-4A0A0B4J1K2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav9-4A0A0B4J1K2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-4A0A0B4J1K2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-4A0A0B4J1K2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-4A0A0B4J1K2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav9-4A0A0B4J1K2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav9-4A0A0B4J1K2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav9-4A0A0B4J1K2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Gm21956-201ENSMUST00000179946 522 ntBASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.94□□□□□ -0.02
Trav9-4A0A0B4J1K2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms