Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav11A0A0B4J1J9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav11A0A0B4J1J9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav11A0A0B4J1J9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav11A0A0B4J1J9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav11A0A0B4J1J9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav11A0A0B4J1J9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav11A0A0B4J1J9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav11A0A0B4J1J9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav11A0A0B4J1J9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav11A0A0B4J1J9 Gm7332-201ENSMUST00000118351 454 ntBASIC13.71□□□□□ -0.21
Trav11A0A0B4J1J9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav11A0A0B4J1J9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav11A0A0B4J1J9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav11A0A0B4J1J9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav11A0A0B4J1J9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav11A0A0B4J1J9 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.71□□□□□ -0.22
Trav11A0A0B4J1J9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav11A0A0B4J1J9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav11A0A0B4J1J9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav11A0A0B4J1J9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav11A0A0B4J1J9 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.7□□□□□ -0.22
Trav11A0A0B4J1J9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav11A0A0B4J1J9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav11A0A0B4J1J9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC13.7□□□□□ -0.22
Trav11A0A0B4J1J9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav11A0A0B4J1J9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav11A0A0B4J1J9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav11A0A0B4J1J9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav11A0A0B4J1J9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav11A0A0B4J1J9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav11A0A0B4J1J9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav11A0A0B4J1J9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav11A0A0B4J1J9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav11A0A0B4J1J9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav11A0A0B4J1J9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav11A0A0B4J1J9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav11A0A0B4J1J9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav11A0A0B4J1J9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav11A0A0B4J1J9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav11A0A0B4J1J9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav11A0A0B4J1J9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav11A0A0B4J1J9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav11A0A0B4J1J9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav11A0A0B4J1J9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav11A0A0B4J1J9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav11A0A0B4J1J9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav11A0A0B4J1J9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav11A0A0B4J1J9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav11A0A0B4J1J9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms