Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Igkv5-43A0A0B4J1J2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.64■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.63■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Igkv5-43A0A0B4J1J2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Smad6-203ENSMUST00000179458 273 ntBASIC20.63■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.63■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Igkv5-43A0A0B4J1J2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.61■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Igkv5-43A0A0B4J1J2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.6■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.59■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Gm26833-201ENSMUST00000180899 440 ntBASIC20.59■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.58■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.58■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.58■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.58■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.57■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Igkv5-43A0A0B4J1J2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.57■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.56■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Igkv5-43A0A0B4J1J2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.55■□□□□ 0.88
Igkv5-43A0A0B4J1J2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.55■□□□□ 0.88
Igkv5-43A0A0B4J1J2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.54■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.54■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.53■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Gm40848-201ENSMUST00000221998 324 ntBASIC20.52■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Igkv5-43A0A0B4J1J2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms