Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.06■□□□□ 0.16
Trbv19A0A0B4J1H4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.06■□□□□ 0.16
Trbv19A0A0B4J1H4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.06■□□□□ 0.16
Trbv19A0A0B4J1H4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv19A0A0B4J1H4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv19A0A0B4J1H4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv19A0A0B4J1H4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv19A0A0B4J1H4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trbv19A0A0B4J1H4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv19A0A0B4J1H4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.05■□□□□ 0.16
Trbv19A0A0B4J1H4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trbv19A0A0B4J1H4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trbv19A0A0B4J1H4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv19A0A0B4J1H4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv19A0A0B4J1H4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv19A0A0B4J1H4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv19A0A0B4J1H4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv19A0A0B4J1H4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv19A0A0B4J1H4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv19A0A0B4J1H4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv19A0A0B4J1H4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv19A0A0B4J1H4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv19A0A0B4J1H4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv19A0A0B4J1H4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv19A0A0B4J1H4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv19A0A0B4J1H4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.02■□□□□ 0.16
Trbv19A0A0B4J1H4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv19A0A0B4J1H4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv19A0A0B4J1H4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv19A0A0B4J1H4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv19A0A0B4J1H4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv19A0A0B4J1H4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv19A0A0B4J1H4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv19A0A0B4J1H4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv19A0A0B4J1H4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv19A0A0B4J1H4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv19A0A0B4J1H4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv19A0A0B4J1H4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv19A0A0B4J1H4 Gm5812-201ENSMUST00000061073 957 ntBASIC16■□□□□ 0.15
Trbv19A0A0B4J1H4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv19A0A0B4J1H4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv19A0A0B4J1H4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv19A0A0B4J1H4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trbv19A0A0B4J1H4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv19A0A0B4J1H4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv19A0A0B4J1H4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv19A0A0B4J1H4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv19A0A0B4J1H4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv19A0A0B4J1H4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.99■□□□□ 0.15
Trbv19A0A0B4J1H4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Trbv19A0A0B4J1H4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms