Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trbv13-3A0A0B4J1H2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.6■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv13-3A0A0B4J1H2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.59■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv13-3A0A0B4J1H2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Trbv13-3A0A0B4J1H2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.59■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.59■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.58■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Gm11599-201ENSMUST00000118720 878 ntBASIC15.58■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Gm7432-201ENSMUST00000210343 879 ntBASIC15.58■□□□□ 0.08
Trbv13-3A0A0B4J1H2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.58■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.58■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.54■□□□□ 0.08
Trbv13-3A0A0B4J1H2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.54■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.54■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv13-3A0A0B4J1H2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms