Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv12-1A0A0B4J1H0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv12-1A0A0B4J1H0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.76■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.76■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.74■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv12-1A0A0B4J1H0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.73■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv12-1A0A0B4J1H0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv12-1A0A0B4J1H0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.73■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.71■□□□□ 0.43
Trbv12-1A0A0B4J1H0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.7■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Gm12821-201ENSMUST00000120022 600 ntBASIC17.7■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Gm43137-201ENSMUST00000198052 594 ntBASIC17.7■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv12-1A0A0B4J1H0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms