Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv15A0A0A6YYE3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv15A0A0A6YYE3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv15A0A0A6YYE3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv15A0A0A6YYE3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv15A0A0A6YYE3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv15A0A0A6YYE3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv15A0A0A6YYE3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv15A0A0A6YYE3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv15A0A0A6YYE3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv15A0A0A6YYE3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv15A0A0A6YYE3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv15A0A0A6YYE3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv15A0A0A6YYE3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv15A0A0A6YYE3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trbv15A0A0A6YYE3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv15A0A0A6YYE3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv15A0A0A6YYE3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv15A0A0A6YYE3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.62■□□□□ 0.25
Trbv15A0A0A6YYE3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trbv15A0A0A6YYE3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv15A0A0A6YYE3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv15A0A0A6YYE3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Trbv15A0A0A6YYE3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv15A0A0A6YYE3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv15A0A0A6YYE3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv15A0A0A6YYE3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv15A0A0A6YYE3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv15A0A0A6YYE3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv15A0A0A6YYE3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv15A0A0A6YYE3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv15A0A0A6YYE3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv15A0A0A6YYE3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.61■□□□□ 0.25
Trbv15A0A0A6YYE3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.6■□□□□ 0.25
Trbv15A0A0A6YYE3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv15A0A0A6YYE3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.59■□□□□ 0.25
Trbv15A0A0A6YYE3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv15A0A0A6YYE3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv15A0A0A6YYE3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv15A0A0A6YYE3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv15A0A0A6YYE3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trbv15A0A0A6YYE3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv15A0A0A6YYE3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv15A0A0A6YYE3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trbv15A0A0A6YYE3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv15A0A0A6YYE3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv15A0A0A6YYE3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv15A0A0A6YYE3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv15A0A0A6YYE3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv15A0A0A6YYE3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv15A0A0A6YYE3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv15A0A0A6YYE3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv15A0A0A6YYE3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv15A0A0A6YYE3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv15A0A0A6YYE3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv15A0A0A6YYE3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv15A0A0A6YYE3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv15A0A0A6YYE3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv15A0A0A6YYE3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trbv15A0A0A6YYE3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.57■□□□□ 0.24
Trbv15A0A0A6YYE3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv15A0A0A6YYE3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trbv15A0A0A6YYE3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv15A0A0A6YYE3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv15A0A0A6YYE3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv15A0A0A6YYE3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbv15A0A0A6YYE3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv15A0A0A6YYE3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.55■□□□□ 0.24
Trbv15A0A0A6YYE3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv15A0A0A6YYE3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms