Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv21A0A0A6YX06 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv21A0A0A6YX06 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trbv21A0A0A6YX06 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Notumos-201ENSMUST00000151998 2659 ntBASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv21A0A0A6YX06 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv21A0A0A6YX06 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Trbv21A0A0A6YX06 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv21A0A0A6YX06 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv21A0A0A6YX06 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv21A0A0A6YX06 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.58■□□□□ 0.56
Trbv21A0A0A6YX06 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trbv21A0A0A6YX06 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv21A0A0A6YX06 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv21A0A0A6YX06 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Trbv21A0A0A6YX06 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.57■□□□□ 0.56
Trbv21A0A0A6YX06 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trbv21A0A0A6YX06 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trbv21A0A0A6YX06 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv21A0A0A6YX06 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trbv21A0A0A6YX06 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.57■□□□□ 0.56
Trbv21A0A0A6YX06 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv21A0A0A6YX06 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.57■□□□□ 0.56
Trbv21A0A0A6YX06 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv21A0A0A6YX06 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv21A0A0A6YX06 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.57■□□□□ 0.56
Trbv21A0A0A6YX06 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.56■□□□□ 0.56
Trbv21A0A0A6YX06 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv21A0A0A6YX06 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv21A0A0A6YX06 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv21A0A0A6YX06 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv21A0A0A6YX06 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv21A0A0A6YX06 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv21A0A0A6YX06 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trbv21A0A0A6YX06 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv21A0A0A6YX06 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.55■□□□□ 0.56
Trbv21A0A0A6YX06 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trbv21A0A0A6YX06 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv21A0A0A6YX06 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv21A0A0A6YX06 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trbv21A0A0A6YX06 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv21A0A0A6YX06 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.54■□□□□ 0.56
Trbv21A0A0A6YX06 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv21A0A0A6YX06 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv21A0A0A6YX06 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv21A0A0A6YX06 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv21A0A0A6YX06 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv21A0A0A6YX06 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv21A0A0A6YX06 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv21A0A0A6YX06 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv21A0A0A6YX06 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trbv21A0A0A6YX06 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv21A0A0A6YX06 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv21A0A0A6YX06 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trbv21A0A0A6YX06 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv21A0A0A6YX06 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv21A0A0A6YX06 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv21A0A0A6YX06 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trbv21A0A0A6YX06 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv21A0A0A6YX06 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv21A0A0A6YX06 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv21A0A0A6YX06 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.52■□□□□ 0.56
Trbv21A0A0A6YX06 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trbv21A0A0A6YX06 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv21A0A0A6YX06 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv21A0A0A6YX06 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.51■□□□□ 0.55
Trbv21A0A0A6YX06 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv21A0A0A6YX06 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv21A0A0A6YX06 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv21A0A0A6YX06 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv21A0A0A6YX06 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv21A0A0A6YX06 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv21A0A0A6YX06 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv21A0A0A6YX06 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.5■□□□□ 0.55
Trbv21A0A0A6YX06 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv21A0A0A6YX06 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv21A0A0A6YX06 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trbv21A0A0A6YX06 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv21A0A0A6YX06 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv21A0A0A6YX06 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv21A0A0A6YX06 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv21A0A0A6YX06 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.49■□□□□ 0.55
Trbv21A0A0A6YX06 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
Trbv21A0A0A6YX06 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Trbv21A0A0A6YX06 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv21A0A0A6YX06 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv21A0A0A6YX06 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms