Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbc1A0A0A6YWV4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.35■□□□□ 0.53
Trbc1A0A0A6YWV4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trbc1A0A0A6YWV4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbc1A0A0A6YWV4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbc1A0A0A6YWV4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.35■□□□□ 0.53
Trbc1A0A0A6YWV4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.35■□□□□ 0.53
Trbc1A0A0A6YWV4 Gm43530-201ENSMUST00000195920 274 ntBASIC18.35■□□□□ 0.53
Trbc1A0A0A6YWV4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbc1A0A0A6YWV4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbc1A0A0A6YWV4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbc1A0A0A6YWV4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbc1A0A0A6YWV4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbc1A0A0A6YWV4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trbc1A0A0A6YWV4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbc1A0A0A6YWV4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbc1A0A0A6YWV4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbc1A0A0A6YWV4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbc1A0A0A6YWV4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbc1A0A0A6YWV4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trbc1A0A0A6YWV4 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.33■□□□□ 0.52
Trbc1A0A0A6YWV4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.33■□□□□ 0.52
Trbc1A0A0A6YWV4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbc1A0A0A6YWV4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trbc1A0A0A6YWV4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbc1A0A0A6YWV4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbc1A0A0A6YWV4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbc1A0A0A6YWV4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbc1A0A0A6YWV4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbc1A0A0A6YWV4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbc1A0A0A6YWV4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trbc1A0A0A6YWV4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbc1A0A0A6YWV4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trbc1A0A0A6YWV4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbc1A0A0A6YWV4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trbc1A0A0A6YWV4 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.31■□□□□ 0.52
Trbc1A0A0A6YWV4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.31■□□□□ 0.52
Trbc1A0A0A6YWV4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbc1A0A0A6YWV4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbc1A0A0A6YWV4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbc1A0A0A6YWV4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trbc1A0A0A6YWV4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Trbc1A0A0A6YWV4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trbc1A0A0A6YWV4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trbc1A0A0A6YWV4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trbc1A0A0A6YWV4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbc1A0A0A6YWV4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbc1A0A0A6YWV4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbc1A0A0A6YWV4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trbc1A0A0A6YWV4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbc1A0A0A6YWV4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbc1A0A0A6YWV4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trbc1A0A0A6YWV4 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.3■□□□□ 0.52
Trbc1A0A0A6YWV4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbc1A0A0A6YWV4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trbc1A0A0A6YWV4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbc1A0A0A6YWV4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trbc1A0A0A6YWV4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbc1A0A0A6YWV4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbc1A0A0A6YWV4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbc1A0A0A6YWV4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbc1A0A0A6YWV4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.29■□□□□ 0.52
Trbc1A0A0A6YWV4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trbc1A0A0A6YWV4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trbc1A0A0A6YWV4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbc1A0A0A6YWV4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
Trbc1A0A0A6YWV4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbc1A0A0A6YWV4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbc1A0A0A6YWV4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbc1A0A0A6YWV4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbc1A0A0A6YWV4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbc1A0A0A6YWV4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.28■□□□□ 0.52
Trbc1A0A0A6YWV4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbc1A0A0A6YWV4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbc1A0A0A6YWV4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trbc1A0A0A6YWV4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbc1A0A0A6YWV4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbc1A0A0A6YWV4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbc1A0A0A6YWV4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.27■□□□□ 0.52
Trbc1A0A0A6YWV4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbc1A0A0A6YWV4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.27■□□□□ 0.52
Trbc1A0A0A6YWV4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbc1A0A0A6YWV4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbc1A0A0A6YWV4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbc1A0A0A6YWV4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbc1A0A0A6YWV4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbc1A0A0A6YWV4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbc1A0A0A6YWV4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.26■□□□□ 0.51
Trbc1A0A0A6YWV4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbc1A0A0A6YWV4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbc1A0A0A6YWV4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trbc1A0A0A6YWV4 Gm12821-201ENSMUST00000120022 600 ntBASIC18.26■□□□□ 0.51
Trbc1A0A0A6YWV4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbc1A0A0A6YWV4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Trbc1A0A0A6YWV4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
Trbc1A0A0A6YWV4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbc1A0A0A6YWV4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbc1A0A0A6YWV4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbc1A0A0A6YWV4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbc1A0A0A6YWV4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms