Protein–RNA interactions for Protein: A0A0A6YW39

Ighv16-1, Immunoglobulin heavy variable 16-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv16-1A0A0A6YW39 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv16-1A0A0A6YW39 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv16-1A0A0A6YW39 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ighv16-1A0A0A6YW39 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ighv16-1A0A0A6YW39 Gm12821-201ENSMUST00000120022 600 ntBASIC18.48■□□□□ 0.55
Ighv16-1A0A0A6YW39 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.48■□□□□ 0.55
Ighv16-1A0A0A6YW39 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ighv16-1A0A0A6YW39 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv16-1A0A0A6YW39 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv16-1A0A0A6YW39 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 Gm27454-201ENSMUST00000185090 204 ntBASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 Gm43137-201ENSMUST00000198052 594 ntBASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv16-1A0A0A6YW39 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv16-1A0A0A6YW39 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv16-1A0A0A6YW39 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv16-1A0A0A6YW39 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv16-1A0A0A6YW39 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv16-1A0A0A6YW39 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv16-1A0A0A6YW39 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv16-1A0A0A6YW39 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.46■□□□□ 0.55
Ighv16-1A0A0A6YW39 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv16-1A0A0A6YW39 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv16-1A0A0A6YW39 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv16-1A0A0A6YW39 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv16-1A0A0A6YW39 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ighv16-1A0A0A6YW39 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv16-1A0A0A6YW39 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ighv16-1A0A0A6YW39 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv16-1A0A0A6YW39 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv16-1A0A0A6YW39 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv16-1A0A0A6YW39 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.44■□□□□ 0.54
Ighv16-1A0A0A6YW39 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv16-1A0A0A6YW39 Mir6236-201ENSMUST00000184437 123 ntBASIC18.44■□□□□ 0.54
Ighv16-1A0A0A6YW39 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.44■□□□□ 0.54
Ighv16-1A0A0A6YW39 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ighv16-1A0A0A6YW39 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ighv16-1A0A0A6YW39 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.44■□□□□ 0.54
Ighv16-1A0A0A6YW39 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv16-1A0A0A6YW39 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv16-1A0A0A6YW39 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ighv16-1A0A0A6YW39 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv16-1A0A0A6YW39 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv16-1A0A0A6YW39 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv16-1A0A0A6YW39 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv16-1A0A0A6YW39 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ighv16-1A0A0A6YW39 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.43■□□□□ 0.54
Ighv16-1A0A0A6YW39 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.43■□□□□ 0.54
Ighv16-1A0A0A6YW39 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv16-1A0A0A6YW39 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv16-1A0A0A6YW39 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ighv16-1A0A0A6YW39 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv16-1A0A0A6YW39 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv16-1A0A0A6YW39 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.42■□□□□ 0.54
Ighv16-1A0A0A6YW39 Gm45417-201ENSMUST00000209533 758 ntBASIC18.42■□□□□ 0.54
Ighv16-1A0A0A6YW39 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv16-1A0A0A6YW39 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv16-1A0A0A6YW39 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ighv16-1A0A0A6YW39 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv16-1A0A0A6YW39 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv16-1A0A0A6YW39 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv16-1A0A0A6YW39 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv16-1A0A0A6YW39 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv16-1A0A0A6YW39 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv16-1A0A0A6YW39 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv16-1A0A0A6YW39 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
Ighv16-1A0A0A6YW39 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
Ighv16-1A0A0A6YW39 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv16-1A0A0A6YW39 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.4■□□□□ 0.54
Ighv16-1A0A0A6YW39 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv16-1A0A0A6YW39 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.4■□□□□ 0.54
Ighv16-1A0A0A6YW39 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv16-1A0A0A6YW39 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms