Protein–RNA interactions for Protein: A0A0A6YW26

Ighv8-4, Immunoglobulin heavy variable V8-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-4A0A0A6YW26 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ighv8-4A0A0A6YW26 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ighv8-4A0A0A6YW26 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Gm7417-201ENSMUST00000192950 473 ntBASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ighv8-4A0A0A6YW26 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv8-4A0A0A6YW26 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv8-4A0A0A6YW26 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv8-4A0A0A6YW26 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.12■□□□□ 0.01
Ighv8-4A0A0A6YW26 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.12■□□□□ 0.01
Ighv8-4A0A0A6YW26 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv8-4A0A0A6YW26 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv8-4A0A0A6YW26 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv8-4A0A0A6YW26 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.12■□□□□ 0.01
Ighv8-4A0A0A6YW26 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ighv8-4A0A0A6YW26 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ighv8-4A0A0A6YW26 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv8-4A0A0A6YW26 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv8-4A0A0A6YW26 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv8-4A0A0A6YW26 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv8-4A0A0A6YW26 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv8-4A0A0A6YW26 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv8-4A0A0A6YW26 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.11■□□□□ 0.01
Ighv8-4A0A0A6YW26 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.11■□□□□ 0.01
Ighv8-4A0A0A6YW26 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv8-4A0A0A6YW26 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv8-4A0A0A6YW26 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.11■□□□□ 0.01
Ighv8-4A0A0A6YW26 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv8-4A0A0A6YW26 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.11■□□□□ 0.01
Ighv8-4A0A0A6YW26 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ighv8-4A0A0A6YW26 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv8-4A0A0A6YW26 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv8-4A0A0A6YW26 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.1■□□□□ 0.01
Ighv8-4A0A0A6YW26 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.1■□□□□ 0.01
Ighv8-4A0A0A6YW26 Gm10399-202ENSMUST00000202768 748 ntBASIC15.1■□□□□ 0.01
Ighv8-4A0A0A6YW26 Gm40881-201ENSMUST00000223397 166 ntBASIC15.1■□□□□ 0.01
Ighv8-4A0A0A6YW26 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv8-4A0A0A6YW26 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.1■□□□□ 0.01
Ighv8-4A0A0A6YW26 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ighv8-4A0A0A6YW26 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ighv8-4A0A0A6YW26 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv8-4A0A0A6YW26 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Ighv8-4A0A0A6YW26 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ighv8-4A0A0A6YW26 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Ighv8-4A0A0A6YW26 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ighv8-4A0A0A6YW26 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ighv8-4A0A0A6YW26 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.08■□□□□ 0.01
Ighv8-4A0A0A6YW26 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms