Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-4A0A075B6B4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-4A0A075B6B4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-4A0A075B6B4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-4A0A075B6B4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-4A0A075B6B4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-4A0A075B6B4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-4A0A075B6B4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-4A0A075B6B4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-4A0A075B6B4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-4A0A075B6B4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.39■□□□□ 0.05
Trav6-4A0A075B6B4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-4A0A075B6B4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav6-4A0A075B6B4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-4A0A075B6B4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Trav6-4A0A075B6B4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-4A0A075B6B4 Gm13241-201ENSMUST00000094493 780 ntBASIC15.38■□□□□ 0.05
Trav6-4A0A075B6B4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-4A0A075B6B4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-4A0A075B6B4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-4A0A075B6B4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav6-4A0A075B6B4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-4A0A075B6B4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 Mir6236-201ENSMUST00000184437 123 ntBASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-4A0A075B6B4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav6-4A0A075B6B4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-4A0A075B6B4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-4A0A075B6B4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.36■□□□□ 0.05
Trav6-4A0A075B6B4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Trav6-4A0A075B6B4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-4A0A075B6B4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-4A0A075B6B4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-4A0A075B6B4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav6-4A0A075B6B4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-4A0A075B6B4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.35■□□□□ 0.05
Trav6-4A0A075B6B4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-4A0A075B6B4 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.35■□□□□ 0.05
Trav6-4A0A075B6B4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-4A0A075B6B4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-4A0A075B6B4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-4A0A075B6B4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-4A0A075B6B4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-4A0A075B6B4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Trav6-4A0A075B6B4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6-4A0A075B6B4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav6-4A0A075B6B4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6-4A0A075B6B4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6-4A0A075B6B4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.33■□□□□ 0.05
Trav6-4A0A075B6B4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6-4A0A075B6B4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Trav6-4A0A075B6B4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms