Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav5-4A0A075B652 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav5-4A0A075B652 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.61■□□□□ 0.25
Trav5-4A0A075B652 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5-4A0A075B652 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5-4A0A075B652 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5-4A0A075B652 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.6■□□□□ 0.25
Trav5-4A0A075B652 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5-4A0A075B652 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5-4A0A075B652 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5-4A0A075B652 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5-4A0A075B652 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.6■□□□□ 0.25
Trav5-4A0A075B652 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5-4A0A075B652 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav5-4A0A075B652 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-4A0A075B652 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-4A0A075B652 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav5-4A0A075B652 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-4A0A075B652 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-4A0A075B652 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.59■□□□□ 0.25
Trav5-4A0A075B652 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-4A0A075B652 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-4A0A075B652 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav5-4A0A075B652 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav5-4A0A075B652 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-4A0A075B652 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-4A0A075B652 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav5-4A0A075B652 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav5-4A0A075B652 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav5-4A0A075B652 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.58■□□□□ 0.24
Trav5-4A0A075B652 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5-4A0A075B652 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5-4A0A075B652 Gm5812-201ENSMUST00000061073 957 ntBASIC16.58■□□□□ 0.24
Trav5-4A0A075B652 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5-4A0A075B652 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5-4A0A075B652 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5-4A0A075B652 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav5-4A0A075B652 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-4A0A075B652 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav5-4A0A075B652 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-4A0A075B652 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-4A0A075B652 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-4A0A075B652 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.57■□□□□ 0.24
Trav5-4A0A075B652 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.57■□□□□ 0.24
Trav5-4A0A075B652 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.57■□□□□ 0.24
Trav5-4A0A075B652 Gm7143-201ENSMUST00000222811 859 ntBASIC16.57■□□□□ 0.24
Trav5-4A0A075B652 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-4A0A075B652 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.57■□□□□ 0.24
Trav5-4A0A075B652 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav5-4A0A075B652 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav5-4A0A075B652 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5-4A0A075B652 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Trav5-4A0A075B652 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5-4A0A075B652 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5-4A0A075B652 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5-4A0A075B652 Gm15546-201ENSMUST00000122095 826 ntBASIC16.56■□□□□ 0.24
Trav5-4A0A075B652 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav5-4A0A075B652 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5-4A0A075B652 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav5-4A0A075B652 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav5-4A0A075B652 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms