Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16nA0A075B634 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16nA0A075B634 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16nA0A075B634 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16nA0A075B634 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16nA0A075B634 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16nA0A075B634 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.1■□□□□ 0.01
Trav16nA0A075B634 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16nA0A075B634 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16nA0A075B634 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16nA0A075B634 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16nA0A075B634 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16nA0A075B634 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16nA0A075B634 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16nA0A075B634 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Gm14523-201ENSMUST00000117260 558 ntBASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav16nA0A075B634 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav16nA0A075B634 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav16nA0A075B634 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav16nA0A075B634 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16nA0A075B634 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16nA0A075B634 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.08■□□□□ 0
Trav16nA0A075B634 Gm27502-201ENSMUST00000183495 199 ntBASIC15.08■□□□□ 0
Trav16nA0A075B634 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.08■□□□□ 0
Trav16nA0A075B634 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16nA0A075B634 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav16nA0A075B634 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav16nA0A075B634 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.08■□□□□ 0
Trav16nA0A075B634 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16nA0A075B634 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16nA0A075B634 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16nA0A075B634 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav16nA0A075B634 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16nA0A075B634 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16nA0A075B634 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav16nA0A075B634 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.07■□□□□ 0
Trav16nA0A075B634 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.07■□□□□ 0
Trav16nA0A075B634 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.07■□□□□ 0
Trav16nA0A075B634 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav16nA0A075B634 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trav16nA0A075B634 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Trav16nA0A075B634 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.06■□□□□ 0
Trav16nA0A075B634 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav16nA0A075B634 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav16nA0A075B634 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16nA0A075B634 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16nA0A075B634 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16nA0A075B634 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.06■□□□□ 0
Trav16nA0A075B634 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16nA0A075B634 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16nA0A075B634 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16nA0A075B634 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16nA0A075B634 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Trav16nA0A075B634 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav16nA0A075B634 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.05■□□□□ 0
Trav16nA0A075B634 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav16nA0A075B634 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav16nA0A075B634 Gm7332-201ENSMUST00000118351 454 ntBASIC15.05■□□□□ -0
Trav16nA0A075B634 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav16nA0A075B634 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.05■□□□□ -0
Trav16nA0A075B634 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav16nA0A075B634 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16nA0A075B634 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav16nA0A075B634 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.04■□□□□ -0
Trav16nA0A075B634 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav16nA0A075B634 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16nA0A075B634 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16nA0A075B634 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16nA0A075B634 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav16nA0A075B634 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16nA0A075B634 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16nA0A075B634 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16nA0A075B634 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16nA0A075B634 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16nA0A075B634 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16nA0A075B634 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16nA0A075B634 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav16nA0A075B634 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16nA0A075B634 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16nA0A075B634 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav16nA0A075B634 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms