Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10nA0A075B622 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav10nA0A075B622 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav10nA0A075B622 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav10nA0A075B622 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav10nA0A075B622 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav10nA0A075B622 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav10nA0A075B622 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.75■□□□□ 0.43
Trav10nA0A075B622 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trav10nA0A075B622 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav10nA0A075B622 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav10nA0A075B622 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav10nA0A075B622 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav10nA0A075B622 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav10nA0A075B622 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav10nA0A075B622 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.74■□□□□ 0.43
Trav10nA0A075B622 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav10nA0A075B622 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav10nA0A075B622 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav10nA0A075B622 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.74■□□□□ 0.43
Trav10nA0A075B622 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav10nA0A075B622 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav10nA0A075B622 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav10nA0A075B622 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav10nA0A075B622 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.73■□□□□ 0.43
Trav10nA0A075B622 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav10nA0A075B622 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav10nA0A075B622 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav10nA0A075B622 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.73■□□□□ 0.43
Trav10nA0A075B622 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Trav10nA0A075B622 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav10nA0A075B622 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav10nA0A075B622 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav10nA0A075B622 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav10nA0A075B622 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Trav10nA0A075B622 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav10nA0A075B622 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav10nA0A075B622 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav10nA0A075B622 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav10nA0A075B622 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav10nA0A075B622 Gm43530-201ENSMUST00000195920 274 ntBASIC17.72■□□□□ 0.43
Trav10nA0A075B622 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav10nA0A075B622 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav10nA0A075B622 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav10nA0A075B622 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav10nA0A075B622 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav10nA0A075B622 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10nA0A075B622 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10nA0A075B622 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10nA0A075B622 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10nA0A075B622 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10nA0A075B622 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.71■□□□□ 0.43
Trav10nA0A075B622 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav10nA0A075B622 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10nA0A075B622 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav10nA0A075B622 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10nA0A075B622 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav10nA0A075B622 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav10nA0A075B622 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav10nA0A075B622 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trav10nA0A075B622 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10nA0A075B622 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10nA0A075B622 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10nA0A075B622 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10nA0A075B622 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav10nA0A075B622 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10nA0A075B622 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10nA0A075B622 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10nA0A075B622 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10nA0A075B622 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav10nA0A075B622 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10nA0A075B622 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav10nA0A075B622 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav10nA0A075B622 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav10nA0A075B622 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav10nA0A075B622 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav10nA0A075B622 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav10nA0A075B622 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav10nA0A075B622 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav10nA0A075B622 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav10nA0A075B622 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10nA0A075B622 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav10nA0A075B622 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10nA0A075B622 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav10nA0A075B622 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms