Protein–RNA interactions for Protein: Q5M8Q2

H2al1a, Histone H2A-like 1, mousemouse

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1aQ5M8Q2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2al1aQ5M8Q2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
H2al1aQ5M8Q2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2al1aQ5M8Q2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2al1aQ5M8Q2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2al1aQ5M8Q2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
H2al1aQ5M8Q2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2al1aQ5M8Q2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2al1aQ5M8Q2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2al1aQ5M8Q2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
H2al1aQ5M8Q2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2al1aQ5M8Q2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
H2al1aQ5M8Q2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC15.77■□□□□ 0.12
H2al1aQ5M8Q2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2al1aQ5M8Q2 Gm9905-201ENSMUST00000065740 1845 ntBASIC15.77■□□□□ 0.11
H2al1aQ5M8Q2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
H2al1aQ5M8Q2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2al1aQ5M8Q2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
H2al1aQ5M8Q2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2al1aQ5M8Q2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.73■□□□□ 0.11
H2al1aQ5M8Q2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2al1aQ5M8Q2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
H2al1aQ5M8Q2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2al1aQ5M8Q2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC15.69■□□□□ 0.1
H2al1aQ5M8Q2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H2al1aQ5M8Q2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
H2al1aQ5M8Q2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2al1aQ5M8Q2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2al1aQ5M8Q2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
H2al1aQ5M8Q2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2al1aQ5M8Q2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2al1aQ5M8Q2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H2al1aQ5M8Q2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2al1aQ5M8Q2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2al1aQ5M8Q2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2al1aQ5M8Q2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
H2al1aQ5M8Q2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2al1aQ5M8Q2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
H2al1aQ5M8Q2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2al1aQ5M8Q2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2al1aQ5M8Q2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2al1aQ5M8Q2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2al1aQ5M8Q2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2al1aQ5M8Q2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2al1aQ5M8Q2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2al1aQ5M8Q2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2al1aQ5M8Q2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2al1aQ5M8Q2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
H2al1aQ5M8Q2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
H2al1aQ5M8Q2 Gm10524-201ENSMUST00000181931 1893 ntBASIC15.57■□□□□ 0.08
H2al1aQ5M8Q2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
H2al1aQ5M8Q2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2al1aQ5M8Q2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
H2al1aQ5M8Q2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2al1aQ5M8Q2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2al1aQ5M8Q2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2al1aQ5M8Q2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2al1aQ5M8Q2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2al1aQ5M8Q2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2al1aQ5M8Q2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC15.51■□□□□ 0.07
H2al1aQ5M8Q2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2al1aQ5M8Q2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2al1aQ5M8Q2 Gm6206-201ENSMUST00000133472 2199 ntBASIC15.49■□□□□ 0.07
H2al1aQ5M8Q2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2al1aQ5M8Q2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2al1aQ5M8Q2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2al1aQ5M8Q2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
H2al1aQ5M8Q2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2al1aQ5M8Q2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2al1aQ5M8Q2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
H2al1aQ5M8Q2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
H2al1aQ5M8Q2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2al1aQ5M8Q2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2al1aQ5M8Q2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC15.43■□□□□ 0.06
H2al1aQ5M8Q2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2al1aQ5M8Q2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2al1aQ5M8Q2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2al1aQ5M8Q2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
H2al1aQ5M8Q2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
H2al1aQ5M8Q2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2al1aQ5M8Q2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2al1aQ5M8Q2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC15.4■□□□□ 0.06
H2al1aQ5M8Q2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H2al1aQ5M8Q2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2al1aQ5M8Q2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2al1aQ5M8Q2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
H2al1aQ5M8Q2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
H2al1aQ5M8Q2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2al1aQ5M8Q2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
H2al1aQ5M8Q2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
H2al1aQ5M8Q2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
H2al1aQ5M8Q2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2al1aQ5M8Q2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
H2al1aQ5M8Q2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2al1aQ5M8Q2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
H2al1aQ5M8Q2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2al1aQ5M8Q2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H2al1aQ5M8Q2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2al1aQ5M8Q2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2al1aQ5M8Q2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms