Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cks1bP61025 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cks1bP61025 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cks1bP61025 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cks1bP61025 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cks1bP61025 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.06■□□□□ 0.48
Cks1bP61025 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.06■□□□□ 0.48
Cks1bP61025 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cks1bP61025 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cks1bP61025 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cks1bP61025 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cks1bP61025 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cks1bP61025 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cks1bP61025 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.05■□□□□ 0.48
Cks1bP61025 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cks1bP61025 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.04■□□□□ 0.48
Cks1bP61025 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cks1bP61025 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cks1bP61025 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.04■□□□□ 0.48
Cks1bP61025 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cks1bP61025 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.03■□□□□ 0.48
Cks1bP61025 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cks1bP61025 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Cks1bP61025 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cks1bP61025 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cks1bP61025 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cks1bP61025 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Cks1bP61025 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cks1bP61025 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cks1bP61025 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cks1bP61025 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cks1bP61025 Gm25238-201ENSMUST00000174914 89 ntBASIC17.97■□□□□ 0.47
Cks1bP61025 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cks1bP61025 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cks1bP61025 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Cks1bP61025 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cks1bP61025 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cks1bP61025 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cks1bP61025 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Cks1bP61025 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.93■□□□□ 0.46
Cks1bP61025 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cks1bP61025 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cks1bP61025 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cks1bP61025 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Cks1bP61025 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cks1bP61025 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cks1bP61025 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cks1bP61025 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cks1bP61025 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Cks1bP61025 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cks1bP61025 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cks1bP61025 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cks1bP61025 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cks1bP61025 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cks1bP61025 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cks1bP61025 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cks1bP61025 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cks1bP61025 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cks1bP61025 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cks1bP61025 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.83■□□□□ 0.44
Cks1bP61025 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cks1bP61025 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.81■□□□□ 0.44
Cks1bP61025 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.81■□□□□ 0.44
Cks1bP61025 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.8■□□□□ 0.44
Cks1bP61025 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cks1bP61025 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cks1bP61025 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cks1bP61025 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cks1bP61025 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cks1bP61025 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cks1bP61025 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.78■□□□□ 0.44
Cks1bP61025 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cks1bP61025 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.76■□□□□ 0.43
Cks1bP61025 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cks1bP61025 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Cks1bP61025 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cks1bP61025 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cks1bP61025 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cks1bP61025 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cks1bP61025 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cks1bP61025 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cks1bP61025 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cks1bP61025 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cks1bP61025 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Cks1bP61025 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cks1bP61025 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cks1bP61025 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cks1bP61025 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cks1bP61025 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.7■□□□□ 0.42
Cks1bP61025 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cks1bP61025 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
Cks1bP61025 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cks1bP61025 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.69■□□□□ 0.42
Cks1bP61025 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cks1bP61025 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cks1bP61025 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cks1bP61025 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cks1bP61025 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cks1bP61025 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.67■□□□□ 0.42
Cks1bP61025 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 195.2 ms