Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Gm3550W4VSN7 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC9.15□□□□□ -0.94
Gm3550W4VSN7 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Gm3550W4VSN7 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.15□□□□□ -0.94
Gm3550W4VSN7 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Gm3550W4VSN7 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3550W4VSN7 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3550W4VSN7 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3550W4VSN7 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC9.15□□□□□ -0.95
Gm3550W4VSN7 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3550W4VSN7 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3550W4VSN7 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3550W4VSN7 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Gm3550W4VSN7 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3550W4VSN7 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3550W4VSN7 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Gm3550W4VSN7 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.15□□□□□ -0.95
Gm3550W4VSN7 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Gm3550W4VSN7 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3550W4VSN7 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Gm3550W4VSN7 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm23771-201ENSMUST00000178702 110 ntBASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm19015-201ENSMUST00000184002 1189 ntBASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm27910-201ENSMUST00000185004 107 ntBASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm7255-201ENSMUST00000187371 908 ntBASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm28746-201ENSMUST00000187453 380 ntBASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm18042-201ENSMUST00000219887 790 ntBASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm18974-201ENSMUST00000221478 1031 ntBASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 CT030637.1-201ENSMUST00000228016 669 ntBASIC9.14□□□□□ -0.95
Gm3550W4VSN7 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.14□□□□□ -0.95
Gm3550W4VSN7 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Gm3550W4VSN7 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Gm3550W4VSN7 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.13□□□□□ -0.95
Gm3550W4VSN7 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3550W4VSN7 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Gm3550W4VSN7 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3550W4VSN7 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3550W4VSN7 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3550W4VSN7 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3550W4VSN7 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3550W4VSN7 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Gm3550W4VSN7 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms