Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 AC154176.2-201ENSMUST00000225376 6429 ntBASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Gm43435-201ENSMUST00000199996 1438 ntBASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC9.99□□□□□ -0.81
Trim13Q9CYB0 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gm8199-201ENSMUST00000121323 823 ntBASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gm16107-201ENSMUST00000162523 862 ntBASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gm42919-201ENSMUST00000197753 1284 ntBASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gm45166-201ENSMUST00000209073 683 ntBASIC9.98□□□□□ -0.81
Trim13Q9CYB0 CT025561.1-201ENSMUST00000214972 674 ntBASIC9.98□□□□□ -0.81
Trim13Q9CYB0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 AC155266.1-201ENSMUST00000220762 904 ntBASIC9.98□□□□□ -0.81
Trim13Q9CYB0 CT025602.2-201ENSMUST00000226553 772 ntBASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim13Q9CYB0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC9.98□□□□□ -0.81
Trim13Q9CYB0 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Gm45501-201ENSMUST00000211468 2526 ntBASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Gm14208-201ENSMUST00000119645 678 ntBASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Gm14776-201ENSMUST00000121029 887 ntBASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Gm7985-201ENSMUST00000183329 981 ntBASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim13Q9CYB0 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms