Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm5650-201ENSMUST00000209641 598 ntBASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm18164-201ENSMUST00000213769 927 ntBASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm18166-201ENSMUST00000215557 927 ntBASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Lect2-202ENSMUST00000225183 823 ntBASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm8968-201ENSMUST00000199133 1303 ntBASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.25□□□□□ -0.77
Nkx6-1Q99MA9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Defa-ps17-201ENSMUST00000121849 171 ntBASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Gm5190-201ENSMUST00000192434 357 ntBASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Gm2474-201ENSMUST00000195162 559 ntBASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 BB187690-201ENSMUST00000198619 1176 ntBASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Gm29689-201ENSMUST00000221076 589 ntBASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 AC125409.3-201ENSMUST00000223488 653 ntBASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 AC133496.1-201ENSMUST00000223891 743 ntBASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Gm5424-201ENSMUST00000053865 1240 ntBASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Gm4778-201ENSMUST00000098878 1098 ntBASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Nkx6-1Q99MA9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms