Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clp1Q99LI9 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Clp1Q99LI9 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Clp1Q99LI9 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Gm44286-201ENSMUST00000204098 1487 ntBASIC11.46□□□□□ -0.57
Clp1Q99LI9 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Clp1Q99LI9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.46□□□□□ -0.57
Clp1Q99LI9 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Gm12435-201ENSMUST00000118949 1016 ntBASIC11.46□□□□□ -0.57
Clp1Q99LI9 Gm14997-201ENSMUST00000119232 636 ntBASIC11.46□□□□□ -0.57
Clp1Q99LI9 Gm13505-201ENSMUST00000121666 817 ntBASIC11.46□□□□□ -0.57
Clp1Q99LI9 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Gm22662-201ENSMUST00000175290 256 ntBASIC11.46□□□□□ -0.57
Clp1Q99LI9 Gm22876-201ENSMUST00000175450 298 ntBASIC11.46□□□□□ -0.57
Clp1Q99LI9 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Gm18182-201ENSMUST00000191380 1251 ntBASIC11.46□□□□□ -0.57
Clp1Q99LI9 Gm43997-201ENSMUST00000203986 1005 ntBASIC11.46□□□□□ -0.57
Clp1Q99LI9 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC11.46□□□□□ -0.57
Clp1Q99LI9 CU025215.1-201ENSMUST00000222986 603 ntBASIC11.46□□□□□ -0.57
Clp1Q99LI9 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clp1Q99LI9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clp1Q99LI9 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clp1Q99LI9 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clp1Q99LI9 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clp1Q99LI9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clp1Q99LI9 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.46□□□□□ -0.58
Clp1Q99LI9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Clp1Q99LI9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clp1Q99LI9 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Clp1Q99LI9 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clp1Q99LI9 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clp1Q99LI9 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Clp1Q99LI9 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clp1Q99LI9 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clp1Q99LI9 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 Rgr-203ENSMUST00000225070 4704 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm4865-201ENSMUST00000196284 1309 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm14633-201ENSMUST00000121152 470 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Kif4-ps-202ENSMUST00000185083 652 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm8525-201ENSMUST00000189674 861 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm37973-201ENSMUST00000195767 1289 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm9409-201ENSMUST00000197017 316 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm42710-201ENSMUST00000200608 985 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm44388-201ENSMUST00000204350 258 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Clp1Q99LI9 AC154433.1-201ENSMUST00000224401 1183 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 AC139155.1-201ENSMUST00000226043 444 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm8615-201ENSMUST00000025307 771 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 Gm8618-201ENSMUST00000097570 432 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Clp1Q99LI9 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms