Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Usp11Q99K46 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Usp11Q99K46 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Usp11Q99K46 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC11.36□□□□□ -0.59
Usp11Q99K46 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Gm14892-201ENSMUST00000117636 267 ntBASIC11.36□□□□□ -0.59
Usp11Q99K46 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Usp11Q99K46 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.36□□□□□ -0.59
Usp11Q99K46 Gm44158-201ENSMUST00000203881 505 ntBASIC11.36□□□□□ -0.59
Usp11Q99K46 Gm18561-201ENSMUST00000206027 804 ntBASIC11.36□□□□□ -0.59
Usp11Q99K46 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.36□□□□□ -0.59
Usp11Q99K46 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.36□□□□□ -0.59
Usp11Q99K46 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.36□□□□□ -0.59
Usp11Q99K46 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.36□□□□□ -0.59
Usp11Q99K46 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.36□□□□□ -0.59
Usp11Q99K46 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.36□□□□□ -0.59
Usp11Q99K46 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.36□□□□□ -0.59
Usp11Q99K46 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Usp11Q99K46 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.36□□□□□ -0.59
Usp11Q99K46 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Usp11Q99K46 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.36□□□□□ -0.59
Usp11Q99K46 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Usp11Q99K46 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.36□□□□□ -0.59
Usp11Q99K46 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.36□□□□□ -0.59
Usp11Q99K46 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Usp11Q99K46 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.36□□□□□ -0.59
Usp11Q99K46 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Usp11Q99K46 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.35□□□□□ -0.59
Usp11Q99K46 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Gm12899-201ENSMUST00000120565 551 ntBASIC11.35□□□□□ -0.59
Usp11Q99K46 Gm12208-201ENSMUST00000122004 163 ntBASIC11.35□□□□□ -0.59
Usp11Q99K46 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Gm44545-201ENSMUST00000208262 746 ntBASIC11.35□□□□□ -0.59
Usp11Q99K46 Gm5599-201ENSMUST00000209602 788 ntBASIC11.35□□□□□ -0.59
Usp11Q99K46 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.35□□□□□ -0.59
Usp11Q99K46 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.35□□□□□ -0.59
Usp11Q99K46 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.35□□□□□ -0.59
Usp11Q99K46 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.35□□□□□ -0.59
Usp11Q99K46 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.35□□□□□ -0.59
Usp11Q99K46 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Usp11Q99K46 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Usp11Q99K46 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Usp11Q99K46 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Usp11Q99K46 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Usp11Q99K46 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Usp11Q99K46 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Usp11Q99K46 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Usp11Q99K46 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Usp11Q99K46 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Usp11Q99K46 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms