Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Platr10-202ENSMUST00000191479 818 ntBASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Gm33080-201ENSMUST00000205429 172 ntBASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Pcdhb18Q91Y02 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdhb18Q91Y02 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
Pcdhb18Q91Y02 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Gm18010-201ENSMUST00000203553 202 ntBASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.33□□□□□ -0.6
Pcdhb18Q91Y02 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Gm23595-201ENSMUST00000104306 130 ntBASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Gm12418-201ENSMUST00000118116 942 ntBASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Gm8019-201ENSMUST00000119317 587 ntBASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Mir6387-201ENSMUST00000184042 108 ntBASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Mir6953-201ENSMUST00000184745 68 ntBASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Gm44498-201ENSMUST00000199509 111 ntBASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb18Q91Y02 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms