Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Amn1-202ENSMUST00000111535 1457 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Mup-ps1-201ENSMUST00000120720 544 ntBASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Fank1-202ENSMUST00000121560 475 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm26194-201ENSMUST00000175036 71 ntBASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Mir3473c-201ENSMUST00000175262 81 ntBASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Aamdc-214ENSMUST00000178078 723 ntTSL 2 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm26991-201ENSMUST00000180950 620 ntBASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm5982-201ENSMUST00000196234 512 ntBASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm45113-201ENSMUST00000207518 165 ntBASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 E330011O21Rik-201ENSMUST00000209468 1107 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Aamdc-201ENSMUST00000042627 627 ntTSL 3 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Gm38034-201ENSMUST00000193915 2069 ntBASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb17Q91VD8 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm6727-201ENSMUST00000204102 1518 ntBASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm23251-201ENSMUST00000103773 110 ntBASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm6429-201ENSMUST00000117144 475 ntBASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Lyzl1-202ENSMUST00000120837 652 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 8430436N08Rik-201ENSMUST00000129988 1077 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm22226-201ENSMUST00000157355 109 ntBASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm21756-201ENSMUST00000178380 930 ntBASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm21405-201ENSMUST00000179024 930 ntBASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm29299-201ENSMUST00000185609 923 ntBASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb17Q91VD8 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms