Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Gm20796-201ENSMUST00000180355 5838 ntBASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Gm16518-201ENSMUST00000117960 508 ntBASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Gm14270-201ENSMUST00000118388 846 ntBASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Gm10169-201ENSMUST00000121822 348 ntBASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Gm18466-201ENSMUST00000209147 499 ntBASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Gm45594-201ENSMUST00000211717 241 ntBASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim29Q8R2Q0 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Gm4812-201ENSMUST00000182847 993 ntBASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Gm44158-201ENSMUST00000203881 505 ntBASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Gm33080-201ENSMUST00000205429 172 ntBASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Gm32111-201ENSMUST00000207689 846 ntBASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim29Q8R2Q0 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.3□□□□□ -0.44
Trim29Q8R2Q0 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms