Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trub1Q8C0D0 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gm6425-201ENSMUST00000136332 790 ntBASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gm18014-201ENSMUST00000183369 817 ntBASIC11.09□□□□□ -0.63
Trub1Q8C0D0 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gm7082-201ENSMUST00000209880 969 ntBASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gm9139-201ENSMUST00000218817 700 ntBASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gm5178-201ENSMUST00000219380 898 ntBASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.09□□□□□ -0.63
Trub1Q8C0D0 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.09□□□□□ -0.63
Trub1Q8C0D0 AC154431.1-201ENSMUST00000224910 880 ntBASIC11.09□□□□□ -0.63
Trub1Q8C0D0 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trub1Q8C0D0 Gm37516-201ENSMUST00000192593 1954 ntBASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Gm25063-201ENSMUST00000104666 94 ntBASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Gm45310-201ENSMUST00000210436 275 ntBASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trub1Q8C0D0 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms