Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Gm44304-201ENSMUST00000200509 145 ntBASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Gm43811-201ENSMUST00000202862 695 ntBASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Gm45258-201ENSMUST00000210042 853 ntBASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Gm29787-201ENSMUST00000222129 849 ntBASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.78□□□□□ -0.68
Rpp38Q80UU2 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rpp38Q80UU2 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.77□□□□□ -0.68
Rpp38Q80UU2 Gm13437-201ENSMUST00000122434 1981 ntBASIC10.77□□□□□ -0.68
Rpp38Q80UU2 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rpp38Q80UU2 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rpp38Q80UU2 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
Rpp38Q80UU2 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Rpp38Q80UU2 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rpp38Q80UU2 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rpp38Q80UU2 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rpp38Q80UU2 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rpp38Q80UU2 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.77□□□□□ -0.68
Rpp38Q80UU2 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm15031-201ENSMUST00000121341 210 ntBASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm24248-201ENSMUST00000157321 322 ntBASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm25830-201ENSMUST00000158923 132 ntBASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm19918-201ENSMUST00000194858 400 ntBASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm44216-201ENSMUST00000203942 157 ntBASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm18035-201ENSMUST00000211962 589 ntBASIC10.77□□□□□ -0.69
Rpp38Q80UU2 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm10752-201ENSMUST00000218348 729 ntBASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm5805-201ENSMUST00000072779 456 ntBASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rpp38Q80UU2 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.76□□□□□ -0.69
Rpp38Q80UU2 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.76□□□□□ -0.69
Rpp38Q80UU2 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpp38Q80UU2 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.76□□□□□ -0.69
Rpp38Q80UU2 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpp38Q80UU2 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Rpp38Q80UU2 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpp38Q80UU2 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Rpp38Q80UU2 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms