Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm5700-201ENSMUST00000191483 989 ntBASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm42919-201ENSMUST00000197753 1284 ntBASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh19Q80TF3 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm8684-201ENSMUST00000195078 1564 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm18014-201ENSMUST00000183369 817 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm37723-201ENSMUST00000194480 565 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm29747-201ENSMUST00000194764 585 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm5870-201ENSMUST00000196461 282 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm6478-201ENSMUST00000099450 742 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.66□□□□□ -0.7
Pcdh19Q80TF3 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms