Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm22594-201ENSMUST00000104251 130 ntBASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm5944-201ENSMUST00000118182 1001 ntBASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm29763-201ENSMUST00000205306 616 ntBASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm44552-201ENSMUST00000205458 1247 ntBASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.68□□□□□ -0.7
Pcdh8Q7TSK3 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Gm11475-201ENSMUST00000118482 476 ntBASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Gm11502-201ENSMUST00000120917 1211 ntBASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Gm14052-201ENSMUST00000121434 1031 ntBASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Mir1893-201ENSMUST00000122565 83 ntBASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Gm20414-201ENSMUST00000172918 646 ntBASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Gm18733-202ENSMUST00000174447 401 ntBASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 AC153962.2-201ENSMUST00000219417 550 ntBASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 CT025689.1-201ENSMUST00000225214 283 ntBASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh8Q7TSK3 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms