Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm26083-201ENSMUST00000157904 193 ntBASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Gm6677-201ENSMUST00000195100 441 ntBASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Gm7047-201ENSMUST00000196224 1063 ntBASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Scaf4Q6PFF0 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm26670-201ENSMUST00000180429 3287 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm5244-201ENSMUST00000164001 339 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm10774-201ENSMUST00000188689 204 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm37905-201ENSMUST00000195310 341 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm5599-201ENSMUST00000209602 788 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm45331-201ENSMUST00000209868 554 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm7319-201ENSMUST00000210047 778 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm18212-201ENSMUST00000211678 889 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Mt1-202ENSMUST00000211807 1085 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm1821-202ENSMUST00000227415 750 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Olfr582-201ENSMUST00000098212 960 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 AC154849.3-201ENSMUST00000223733 1660 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm37909-201ENSMUST00000193157 2159 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Scaf4Q6PFF0 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC10.58□□□□□ -0.72
Scaf4Q6PFF0 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms