Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 AC102569.1-201ENSMUST00000221563 685 ntBASIC8.24□□□□□ -1.09
NipblQ6KCD5 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
NipblQ6KCD5 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
NipblQ6KCD5 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NipblQ6KCD5 Olfr1419-201ENSMUST00000087857 1160 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
NipblQ6KCD5 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
NipblQ6KCD5 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
NipblQ6KCD5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NipblQ6KCD5 AC116596.1-201ENSMUST00000228112 1762 ntBASIC8.24□□□□□ -1.09
NipblQ6KCD5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
NipblQ6KCD5 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
NipblQ6KCD5 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
NipblQ6KCD5 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NipblQ6KCD5 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NipblQ6KCD5 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
NipblQ6KCD5 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NipblQ6KCD5 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NipblQ6KCD5 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NipblQ6KCD5 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm15793-201ENSMUST00000121857 495 ntBASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm23497-201ENSMUST00000157738 130 ntBASIC8.23□□□□□ -1.09
NipblQ6KCD5 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm5274-201ENSMUST00000182641 1003 ntBASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 CT030195.2-201ENSMUST00000226074 1286 ntBASIC8.23□□□□□ -1.09
NipblQ6KCD5 AC108416.3-201ENSMUST00000226148 557 ntBASIC8.23□□□□□ -1.09
NipblQ6KCD5 AC122459.4-201ENSMUST00000228654 551 ntBASIC8.23□□□□□ -1.09
NipblQ6KCD5 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm44831-201ENSMUST00000208469 2989 ntBASIC8.23□□□□□ -1.09
NipblQ6KCD5 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm6713-201ENSMUST00000216137 1446 ntBASIC8.23□□□□□ -1.09
NipblQ6KCD5 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm21454-201ENSMUST00000178599 1285 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm28032-201ENSMUST00000184104 96 ntBASIC8.23□□□□□ -1.09
NipblQ6KCD5 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm10238-201ENSMUST00000089689 408 ntBASIC8.23□□□□□ -1.09
NipblQ6KCD5 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Pms2-202ENSMUST00000110709 1386 ntTSL 5 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Btg4-201ENSMUST00000114431 1486 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC8.23□□□□□ -1.09
NipblQ6KCD5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm11919-201ENSMUST00000117609 721 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm14571-201ENSMUST00000118292 570 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC8.22□□□□□ -1.09
NipblQ6KCD5 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC8.22□□□□□ -1.09
NipblQ6KCD5 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms