Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Ebf1Q07802 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ebf1Q07802 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Gm44153-201ENSMUST00000204162 1580 ntBASIC11□□□□□ -0.65
Ebf1Q07802 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11□□□□□ -0.65
Ebf1Q07802 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ebf1Q07802 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Gm6758-201ENSMUST00000119643 1055 ntBASIC11□□□□□ -0.65
Ebf1Q07802 Gm14113-201ENSMUST00000121399 976 ntBASIC11□□□□□ -0.65
Ebf1Q07802 Gm5395-201ENSMUST00000121650 915 ntBASIC11□□□□□ -0.65
Ebf1Q07802 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11□□□□□ -0.65
Ebf1Q07802 Gm13827-201ENSMUST00000148801 372 ntBASIC11□□□□□ -0.65
Ebf1Q07802 Gm16547-201ENSMUST00000159474 293 ntBASIC11□□□□□ -0.65
Ebf1Q07802 Gm6612-201ENSMUST00000170777 395 ntBASIC11□□□□□ -0.65
Ebf1Q07802 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ebf1Q07802 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ebf1Q07802 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Mir6953-201ENSMUST00000184745 68 ntBASIC11□□□□□ -0.65
Ebf1Q07802 Gm36991-201ENSMUST00000191800 648 ntBASIC11□□□□□ -0.65
Ebf1Q07802 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
Ebf1Q07802 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11□□□□□ -0.65
Ebf1Q07802 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ebf1Q07802 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ebf1Q07802 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11□□□□□ -0.65
Ebf1Q07802 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ebf1Q07802 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Ebf1Q07802 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11□□□□□ -0.65
Ebf1Q07802 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf1Q07802 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ebf1Q07802 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm23255-201ENSMUST00000102244 110 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm8659-201ENSMUST00000120024 1084 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm18014-201ENSMUST00000183369 817 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 Mir8091-201ENSMUST00000183602 139 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm37723-201ENSMUST00000194480 565 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm42511-201ENSMUST00000196160 234 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm7880-201ENSMUST00000203748 871 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf1Q07802 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.99□□□□□ -0.65
Ebf1Q07802 Gm42970-201ENSMUST00000196407 1352 ntBASIC10.99□□□□□ -0.65
Ebf1Q07802 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms