Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Lsm6P62313 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.49□□□□□ -0.89
Lsm6P62313 Gm18294-201ENSMUST00000176980 1748 ntBASIC9.49□□□□□ -0.89
Lsm6P62313 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Lsm6P62313 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Gm16518-201ENSMUST00000117960 508 ntBASIC9.49□□□□□ -0.89
Lsm6P62313 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC9.49□□□□□ -0.89
Lsm6P62313 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Lsm6P62313 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.49□□□□□ -0.89
Lsm6P62313 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Gm43947-201ENSMUST00000203019 959 ntBASIC9.49□□□□□ -0.89
Lsm6P62313 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Lsm6P62313 Gm44814-201ENSMUST00000207018 434 ntBASIC9.49□□□□□ -0.89
Lsm6P62313 Gm45770-201ENSMUST00000212105 616 ntBASIC9.49□□□□□ -0.89
Lsm6P62313 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC9.49□□□□□ -0.89
Lsm6P62313 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.49□□□□□ -0.89
Lsm6P62313 AC135469.1-201ENSMUST00000225984 772 ntBASIC9.49□□□□□ -0.89
Lsm6P62313 Gm14267-206ENSMUST00000226870 1209 ntBASIC9.49□□□□□ -0.89
Lsm6P62313 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Lsm6P62313 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Lsm6P62313 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.49□□□□□ -0.89
Lsm6P62313 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC9.49□□□□□ -0.89
Lsm6P62313 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Lsm6P62313 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.49□□□□□ -0.89
Lsm6P62313 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Lsm6P62313 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.48□□□□□ -0.89
Lsm6P62313 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.48□□□□□ -0.89
Lsm6P62313 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.48□□□□□ -0.89
Lsm6P62313 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC9.48□□□□□ -0.89
Lsm6P62313 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC9.48□□□□□ -0.89
Lsm6P62313 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Gm12389-201ENSMUST00000117696 418 ntBASIC9.48□□□□□ -0.89
Lsm6P62313 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Lsm6P62313 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC9.48□□□□□ -0.89
Lsm6P62313 Gm7880-201ENSMUST00000203748 871 ntBASIC9.48□□□□□ -0.89
Lsm6P62313 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC9.48□□□□□ -0.89
Lsm6P62313 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC9.48□□□□□ -0.89
Lsm6P62313 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 AC154305.2-201ENSMUST00000225813 901 ntBASIC9.48□□□□□ -0.89
Lsm6P62313 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Lsm6P62313 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.48□□□□□ -0.89
Lsm6P62313 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.48□□□□□ -0.89
Lsm6P62313 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Lsm6P62313 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.47□□□□□ -0.89
Lsm6P62313 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Gm11298-201ENSMUST00000120503 1799 ntBASIC9.47□□□□□ -0.89
Lsm6P62313 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lsm6P62313 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Lsm6P62313 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms