Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Tpm1P58771 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Tpm1P58771 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC11.98□□□□□ -0.49
Tpm1P58771 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tpm1P58771 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tpm1P58771 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Tpm1P58771 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tpm1P58771 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tpm1P58771 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.97□□□□□ -0.49
Tpm1P58771 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Tpm1P58771 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.97□□□□□ -0.49
Tpm1P58771 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.97□□□□□ -0.49
Tpm1P58771 Gm13350-201ENSMUST00000120519 479 ntBASIC11.97□□□□□ -0.49
Tpm1P58771 Gm4917-201ENSMUST00000121452 650 ntBASIC11.97□□□□□ -0.49
Tpm1P58771 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.97□□□□□ -0.49
Tpm1P58771 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.97□□□□□ -0.49
Tpm1P58771 Gm24992-201ENSMUST00000157412 130 ntBASIC11.97□□□□□ -0.49
Tpm1P58771 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Tpm1P58771 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.97□□□□□ -0.49
Tpm1P58771 Gm43916-201ENSMUST00000205062 967 ntBASIC11.97□□□□□ -0.49
Tpm1P58771 Gm31941-201ENSMUST00000209689 350 ntBASIC11.97□□□□□ -0.49
Tpm1P58771 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Tpm1P58771 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.97□□□□□ -0.49
Tpm1P58771 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Tpm1P58771 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Tpm1P58771 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Tpm1P58771 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Tpm1P58771 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Gm10748-202ENSMUST00000194396 2379 ntBASIC11.97□□□□□ -0.49
Tpm1P58771 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tpm1P58771 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tpm1P58771 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tpm1P58771 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Tpm1P58771 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tpm1P58771 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC11.96□□□□□ -0.49
Tpm1P58771 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tpm1P58771 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Tpm1P58771 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tpm1P58771 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.96□□□□□ -0.49
Tpm1P58771 Gm17040-202ENSMUST00000170597 889 ntBASIC11.96□□□□□ -0.49
Tpm1P58771 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.96□□□□□ -0.49
Tpm1P58771 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.96□□□□□ -0.49
Tpm1P58771 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.96□□□□□ -0.49
Tpm1P58771 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.96□□□□□ -0.49
Tpm1P58771 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.96□□□□□ -0.49
Tpm1P58771 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.96□□□□□ -0.49
Tpm1P58771 Gm18042-201ENSMUST00000219887 790 ntBASIC11.96□□□□□ -0.49
Tpm1P58771 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tpm1P58771 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.96□□□□□ -0.49
Tpm1P58771 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tpm1P58771 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tpm1P58771 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tpm1P58771 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tpm1P58771 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.96□□□□□ -0.5
Tpm1P58771 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tpm1P58771 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Tpm1P58771 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.5
Tpm1P58771 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tpm1P58771 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tpm1P58771 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC11.96□□□□□ -0.5
Tpm1P58771 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Tpm1P58771 CT025645.2-201ENSMUST00000223278 3827 ntBASIC11.96□□□□□ -0.5
Tpm1P58771 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tpm1P58771 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tpm1P58771 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tpm1P58771 Gm44699-201ENSMUST00000208229 5083 ntTSL 5 BASIC11.95□□□□□ -0.5
Tpm1P58771 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tpm1P58771 Gm37084-201ENSMUST00000191688 5898 ntBASIC11.95□□□□□ -0.5
Tpm1P58771 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Tpm1P58771 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tpm1P58771 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC11.95□□□□□ -0.5
Tpm1P58771 Gm13035-201ENSMUST00000117496 342 ntBASIC11.95□□□□□ -0.5
Tpm1P58771 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.95□□□□□ -0.5
Tpm1P58771 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms