Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rrp1P56183 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC12.13□□□□□ -0.47
Rrp1P56183 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Rrp1P56183 Gm43999-201ENSMUST00000204286 2889 ntBASIC12.12□□□□□ -0.47
Rrp1P56183 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.12□□□□□ -0.47
Rrp1P56183 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rrp1P56183 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.12□□□□□ -0.47
Rrp1P56183 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC12.12□□□□□ -0.47
Rrp1P56183 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC12.12□□□□□ -0.47
Rrp1P56183 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Gm25076-201ENSMUST00000104098 132 ntBASIC12.12□□□□□ -0.47
Rrp1P56183 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Gm3828-201ENSMUST00000121817 257 ntBASIC12.12□□□□□ -0.47
Rrp1P56183 Gm4726-201ENSMUST00000135604 736 ntBASIC12.12□□□□□ -0.47
Rrp1P56183 Gm6019-201ENSMUST00000148369 736 ntBASIC12.12□□□□□ -0.47
Rrp1P56183 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.12□□□□□ -0.47
Rrp1P56183 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Rrp1P56183 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.12□□□□□ -0.47
Rrp1P56183 Gm43671-201ENSMUST00000200422 433 ntBASIC12.12□□□□□ -0.47
Rrp1P56183 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.12□□□□□ -0.47
Rrp1P56183 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.12□□□□□ -0.47
Rrp1P56183 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.12□□□□□ -0.47
Rrp1P56183 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Rrp1P56183 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rrp1P56183 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Rrp1P56183 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rrp1P56183 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rrp1P56183 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 AC124561.1-202ENSMUST00000228652 1929 ntBASIC12.11□□□□□ -0.47
Rrp1P56183 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rrp1P56183 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC12.11□□□□□ -0.47
Rrp1P56183 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rrp1P56183 Gm37583-201ENSMUST00000195460 2487 ntBASIC12.11□□□□□ -0.47
Rrp1P56183 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rrp1P56183 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Gm15604-201ENSMUST00000118350 1456 ntBASIC12.11□□□□□ -0.47
Rrp1P56183 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rrp1P56183 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.11□□□□□ -0.47
Rrp1P56183 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.11□□□□□ -0.47
Rrp1P56183 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rrp1P56183 Gm25343-201ENSMUST00000157460 107 ntBASIC12.11□□□□□ -0.47
Rrp1P56183 Gm9550-201ENSMUST00000161130 862 ntBASIC12.11□□□□□ -0.47
Rrp1P56183 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.11□□□□□ -0.47
Rrp1P56183 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.11□□□□□ -0.47
Rrp1P56183 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.11□□□□□ -0.47
Rrp1P56183 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Rrp1P56183 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Rrp1P56183 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Gm45867-201ENSMUST00000208201 2317 ntBASIC12.11□□□□□ -0.47
Rrp1P56183 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Gm7357-201ENSMUST00000195361 2991 ntBASIC12.11□□□□□ -0.47
Rrp1P56183 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rrp1P56183 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp1P56183 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC12.11□□□□□ -0.47
Rrp1P56183 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rrp1P56183 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rrp1P56183 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms