Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox1P53783 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Pck2-205ENSMUST00000226352 2784 ntBASIC11.09□□□□□ -0.63
Sox1P53783 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox1P53783 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox1P53783 Gm7001-201ENSMUST00000219384 1465 ntBASIC11.09□□□□□ -0.63
Sox1P53783 Gm44975-201ENSMUST00000207435 1390 ntBASIC11.09□□□□□ -0.63
Sox1P53783 Gm12397-201ENSMUST00000117674 615 ntBASIC11.09□□□□□ -0.63
Sox1P53783 Gm18859-201ENSMUST00000118792 825 ntBASIC11.09□□□□□ -0.63
Sox1P53783 Gm8809-201ENSMUST00000119367 743 ntBASIC11.09□□□□□ -0.63
Sox1P53783 Gm11546-201ENSMUST00000120297 354 ntBASIC11.09□□□□□ -0.63
Sox1P53783 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.09□□□□□ -0.63
Sox1P53783 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC11.09□□□□□ -0.63
Sox1P53783 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sox1P53783 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Sox1P53783 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC11.09□□□□□ -0.63
Sox1P53783 Gm7456-201ENSMUST00000182862 1011 ntBASIC11.09□□□□□ -0.63
Sox1P53783 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox1P53783 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC11.09□□□□□ -0.63
Sox1P53783 Gm18466-201ENSMUST00000209147 499 ntBASIC11.09□□□□□ -0.63
Sox1P53783 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC11.09□□□□□ -0.63
Sox1P53783 AC163038.2-201ENSMUST00000224851 650 ntBASIC11.09□□□□□ -0.63
Sox1P53783 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Sox1P53783 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sox1P53783 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox1P53783 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sox1P53783 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.09□□□□□ -0.63
Sox1P53783 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sox1P53783 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox1P53783 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.63
Sox1P53783 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Sox1P53783 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Sox1P53783 Fsip1-202ENSMUST00000028821 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Sox1P53783 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Sox1P53783 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Gm11700-201ENSMUST00000119409 403 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm13543-201ENSMUST00000121230 796 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Mir1893-201ENSMUST00000122565 83 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.08□□□□□ -0.64
Sox1P53783 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC11.08□□□□□ -0.64
Sox1P53783 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox1P53783 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox1P53783 Mir6981-201ENSMUST00000184293 115 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm29272-201ENSMUST00000185476 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21919-201ENSMUST00000185653 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm28446-201ENSMUST00000186508 694 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm28680-201ENSMUST00000186743 480 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21824-201ENSMUST00000186810 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21862-201ENSMUST00000186957 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21796-201ENSMUST00000187116 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21795-201ENSMUST00000187263 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm28814-201ENSMUST00000187334 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21720-201ENSMUST00000187428 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm20827-201ENSMUST00000187928 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21766-201ENSMUST00000187962 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21837-201ENSMUST00000188117 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox1P53783 Gm21829-201ENSMUST00000188787 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21892-201ENSMUST00000189182 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21777-201ENSMUST00000189307 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm28247-201ENSMUST00000189329 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm28350-201ENSMUST00000189453 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21906-201ENSMUST00000189760 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm29411-201ENSMUST00000189889 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21717-201ENSMUST00000189902 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21765-201ENSMUST00000189913 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21895-201ENSMUST00000189997 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21734-201ENSMUST00000190346 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21902-201ENSMUST00000190361 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm29029-201ENSMUST00000190520 696 ntBASIC11.08□□□□□ -0.64
Sox1P53783 Gm21898-201ENSMUST00000190727 696 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms