Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Mir6546-201ENSMUST00000184460 62 ntBASIC9.75□□□□□ -0.85
Rfx3P48381 Gm37905-201ENSMUST00000195310 341 ntBASIC9.75□□□□□ -0.85
Rfx3P48381 Gm9645-201ENSMUST00000197131 792 ntBASIC9.75□□□□□ -0.85
Rfx3P48381 Gm43916-201ENSMUST00000205062 967 ntBASIC9.75□□□□□ -0.85
Rfx3P48381 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC9.75□□□□□ -0.85
Rfx3P48381 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.75□□□□□ -0.85
Rfx3P48381 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 AC144938.1-201ENSMUST00000223994 2167 ntBASIC9.75□□□□□ -0.85
Rfx3P48381 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Rfx3P48381 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Rfx3P48381 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Rfx3P48381 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.75□□□□□ -0.85
Rfx3P48381 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Rfx3P48381 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.75□□□□□ -0.85
Rfx3P48381 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rfx3P48381 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.74□□□□□ -0.85
Rfx3P48381 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.74□□□□□ -0.85
Rfx3P48381 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Rfx3P48381 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 AC158355.1-201ENSMUST00000215895 1705 ntBASIC9.74□□□□□ -0.85
Rfx3P48381 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Rfx3P48381 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.74□□□□□ -0.85
Rfx3P48381 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Gm25076-201ENSMUST00000104098 132 ntBASIC9.74□□□□□ -0.85
Rfx3P48381 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC9.74□□□□□ -0.85
Rfx3P48381 Gm14592-201ENSMUST00000117201 560 ntBASIC9.74□□□□□ -0.85
Rfx3P48381 Gm12176-201ENSMUST00000121420 875 ntBASIC9.74□□□□□ -0.85
Rfx3P48381 n-R5s14-201ENSMUST00000122688 107 ntBASIC9.74□□□□□ -0.85
Rfx3P48381 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC9.74□□□□□ -0.85
Rfx3P48381 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC9.74□□□□□ -0.85
Rfx3P48381 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Gm44323-201ENSMUST00000198689 129 ntBASIC9.74□□□□□ -0.85
Rfx3P48381 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.74□□□□□ -0.85
Rfx3P48381 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC9.74□□□□□ -0.85
Rfx3P48381 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.74□□□□□ -0.85
Rfx3P48381 Mt1-202ENSMUST00000211807 1085 ntBASIC9.74□□□□□ -0.85
Rfx3P48381 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC9.74□□□□□ -0.85
Rfx3P48381 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.74□□□□□ -0.85
Rfx3P48381 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Rfx3P48381 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Rfx3P48381 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9.74□□□□□ -0.85
Rfx3P48381 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Gm9387-201ENSMUST00000098624 1320 ntBASIC9.74□□□□□ -0.85
Rfx3P48381 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.74□□□□□ -0.85
Rfx3P48381 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rfx3P48381 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rfx3P48381 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rfx3P48381 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.73□□□□□ -0.85
Rfx3P48381 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Rfx3P48381 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rfx3P48381 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
Rfx3P48381 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Rfx3P48381 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rfx3P48381 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.73□□□□□ -0.85
Rfx3P48381 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.73□□□□□ -0.85
Rfx3P48381 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Rfx3P48381 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rfx3P48381 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Rfx3P48381 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rfx3P48381 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rfx3P48381 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rfx3P48381 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Rfx3P48381 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rfx3P48381 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rfx3P48381 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rfx3P48381 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rfx3P48381 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rfx3P48381 Gm12986-201ENSMUST00000119037 967 ntBASIC9.73□□□□□ -0.85
Rfx3P48381 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.73□□□□□ -0.85
Rfx3P48381 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rfx3P48381 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC9.73□□□□□ -0.85
Rfx3P48381 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
Rfx3P48381 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.73□□□□□ -0.85
Rfx3P48381 Gm28032-201ENSMUST00000184104 96 ntBASIC9.73□□□□□ -0.85
Rfx3P48381 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Rfx3P48381 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.73□□□□□ -0.85
Rfx3P48381 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.73□□□□□ -0.85
Rfx3P48381 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC9.73□□□□□ -0.85
Rfx3P48381 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.73□□□□□ -0.85
Rfx3P48381 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms